RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 MTDHQ86UE4 582 aaKnown RBP16.9■□□□□ 0.3
CXXC1-212ENST00000589940 RAB42Q8N4Z0 105 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 METTL6Q8TCB7 284 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 C19orf60Q96EN9 201 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 LRRC61Q9BV99 259 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CCDC177Q9NQR7 707 aaPredicted RBP16.9■□□□□ 0.3
CXXC1-212ENST00000589940 TRPS1Q9UHF7 1281 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 GOLGA8QA0A0J9YX86 632 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 GOLGA8OA6NCC3 632 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CCT8L1PA6NM43 557 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 GOLGA8NF8WBI6 632 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 SDHDO14521 159 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CELA2BP08218 269 aaPredicted RBP16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CSNK1EP49674 416 aaKnown RBP16.9■□□□□ 0.3
CXXC1-212ENST00000589940 FASTKQ14296 549 aaKnown RBP16.9■□□□□ 0.3
CXXC1-212ENST00000589940 PRRT3Q5FWE3 981 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 ACAD11Q709F0 780 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 TAF8Q7Z7C8 310 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 FITM2Q8N6M3 262 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 OR52B2Q96RD2 323 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 GPRC5BQ9NZH0 403 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 RNF11Q9Y3C5 154 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 KCNE2Q9Y6J6 123 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 SPAG17Q6Q759 2223 aa16.89■□□□□ 0.3
CXXC1-212ENST00000589940 PIP5K1BO14986 540 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 DHPSP49366 369 aaPredicted RBP16.89■□□□□ 0.29
CXXC1-212ENST00000589940 RAB28P51157 221 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 C21orf59P57076 290 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 GGTA1PQ4G0N0 100 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 HOMEZQ8IX15 550 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 FBXL6Q8N531 539 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 LMNTD1Q8N9Z9 388 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 MIPEPQ99797 713 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 CCDC28BQ9BUN5 200 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 RAB11FIP5Q9BXF6 653 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 TUBB1Q9H4B7 451 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 ZNF624Q9P2J8 865 aaPredicted RBP16.89■□□□□ 0.29
CXXC1-212ENST00000589940 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 THADAQ6YHU6 1953 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 KDM1AO60341 852 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 UGDHO60701 494 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 GNAZP19086 355 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 PCDH1Q08174 1060 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 TSTA3Q13630 321 aaPredicted RBP16.89■□□□□ 0.29
CXXC1-212ENST00000589940 IYDQ6PHW0 289 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 SUSD1Q6UWL2 747 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 BMP8AQ7Z5Y6 402 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 MYLK4Q86YV6 388 aaPredicted RBP16.89■□□□□ 0.29
CXXC1-212ENST00000589940 DDIASQ8IXT1 998 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 L3MBTL4Q8NA19 623 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 OR52E1Q8NGJ3 308 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 CXorf40BQ96DE9 158 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 ERP27Q96DN0 273 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 MAGEB10Q96LZ2 347 aaPredicted RBP16.89■□□□□ 0.29
CXXC1-212ENST00000589940 CCT7Q99832 543 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 KIR3DX1Q9H7L2 352 aa16.89■□□□□ 0.29
CXXC1-212ENST00000589940 E7EQ34 232 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 WFS1O76024 890 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 SERPINA6P08185 405 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 NPPBP16860 134 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 HMOX2P30519 316 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 SLC19A1P41440 591 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 CHIT1Q13231 466 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 C1orf61Q13536 156 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 ELOCQ15369 112 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 LSM12Q3MHD2 195 aaKnown RBP16.88■□□□□ 0.29
CXXC1-212ENST00000589940 PLK5Q496M5 336 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 ACTRT2Q8TDY3 377 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 SETD7Q8WTS6 366 aaKnown RBP16.88■□□□□ 0.29
CXXC1-212ENST00000589940 SMPDL3AQ92484 453 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 NRTNQ99748 197 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 NMUR2Q9GZQ4 415 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 PFDN4Q9NQP4 134 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 ZFP69BQ9UJL9 534 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 BTRCQ9Y297 605 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 PRAMEF33A0A0G2JMD5 474 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 OR5K4A6NMS3 321 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 FCHO1O14526 889 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 CLGNO14967 610 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 HRO43593 1189 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 PRAMEF4O60810 478 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 CCDC22O60826 627 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 GPR37L1O60883 481 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 PKLRP30613 574 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 IRF8Q02556 426 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 TEAD4Q15561 434 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 TCHHL1Q5QJ38 904 aaPredicted RBP16.88■□□□□ 0.29
CXXC1-212ENST00000589940 PRAMEF9Q5VWM5 478 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 METTL21CQ5VZV1 264 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 CEP70Q8NHQ1 597 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 HMGCLL1Q8TB92 370 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 CCT6BQ92526 530 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 NELL1Q92832 810 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 C3orf30Q96M34 536 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 MYLK2Q9H1R3 596 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 DYRK1BQ9Y463 629 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 PTGDR2Q9Y5Y4 395 aa16.88■□□□□ 0.29
CXXC1-212ENST00000589940 ATXN2Q99700 1313 aaKnown RBP16.87■□□□□ 0.29
CXXC1-212ENST00000589940 FANCMQ8IYD8 2048 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms