RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 CCDC177Q9NQR7 707 aaPredicted RBP17.12■□□□□ 0.33
TMED1-205ENST00000589638 INTS7Q9NVH2 962 aaKnown RBP17.12■□□□□ 0.33
TMED1-205ENST00000589638 MARCOQ9UEW3 520 aaPredicted RBP17.12■□□□□ 0.33
TMED1-205ENST00000589638 USP34Q70CQ2 3546 aa17.12■□□□□ 0.33
TMED1-205ENST00000589638 UBFD1O14562 309 aaKnown RBP17.11■□□□□ 0.33
TMED1-205ENST00000589638 EDF1O60869 148 aaKnown RBP17.11■□□□□ 0.33
TMED1-205ENST00000589638 SHOX2O60902 331 aaPredicted RBP17.11■□□□□ 0.33
TMED1-205ENST00000589638 RETP07949 1114 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 GIMD1P0DJR0 217 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 KITP10721 976 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 EPB42P16452 691 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 SHMT2P34897 504 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 SF3A3Q12874 501 aaKnown RBP eCLIP17.11■□□□□ 0.33
TMED1-205ENST00000589638 LCP2Q13094 533 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 C14orf28Q4W4Y0 310 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 PLA2G2CQ5R387 149 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 FAM219BQ5XKK7 198 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 OGFOD3Q6PK18 319 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 KANSL1Q7Z3B3 1105 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 AMIGO1Q86WK6 493 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 CRLF3Q8IUI8 442 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 KLHDC8AQ8IYD2 350 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 MINDY1Q8N5J2 469 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 ZNF781Q8N8C0 355 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 DCBLD1Q8N8Z6 715 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 LINC01555Q8NAE3 123 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 OR2L8Q8NGY9 312 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 SMPDL3AQ92484 453 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 CDK15Q96Q40 435 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 TRMOQ9BU70 441 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 SRMSQ9H3Y6 488 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 IPPKQ9H8X2 491 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 EML4Q9HC35 981 aaKnown RBP17.11■□□□□ 0.33
TMED1-205ENST00000589638 MID1IP1Q9NPA3 183 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 PNPOQ9NVS9 261 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 FIS1Q9Y3D6 152 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 DYRK1BQ9Y463 629 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 KNL1Q8NG31 2342 aa17.11■□□□□ 0.33
TMED1-205ENST00000589638 ZFC3H1O60293 1989 aaKnown RBP17.11■□□□□ 0.33
TMED1-205ENST00000589638 FANCMQ8IYD8 2048 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 TDRD6O60522 2096 aaKnown RBP17.1■□□□□ 0.33
TMED1-205ENST00000589638 OR7A17O14581 309 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 KATNA1O75449 491 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 MLYCDO95822 493 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 ALPPL2P10696 532 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 MYF5P13349 255 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 PRDX3P30048 256 aaKnown RBP17.1■□□□□ 0.33
TMED1-205ENST00000589638 CCNG1P51959 295 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 NAA20P61599 178 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 CDC16Q13042 620 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 PRAMEF13Q5VWM6 474 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 METTL2BQ6P1Q9 378 aaKnown RBP17.1■□□□□ 0.33
TMED1-205ENST00000589638 TMEM26Q6ZUK4 368 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 SYVN1Q86TM6 617 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 RBM12BQ8IXT5 1001 aaKnown RBP17.1■□□□□ 0.33
TMED1-205ENST00000589638 ARL10Q8N8L6 244 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 SUMF1Q8NBK3 374 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 GPR156Q8NFN8 814 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 OR52B6Q8NGF0 335 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 OR10G6Q8NH81 332 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 ZFPM2Q8WW38 1151 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 THOC1Q96FV9 657 aaKnown RBP17.1■□□□□ 0.33
TMED1-205ENST00000589638 C7orf26Q96N11 449 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 OR4K3Q96R72 315 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 ACAT2Q9BWD1 397 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 SGPP1Q9BX95 441 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 TBC1D10AQ9BXI6 508 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 TNFRSF12AQ9NP84 129 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 NLGN3Q9NZ94 848 aa17.1■□□□□ 0.33
TMED1-205ENST00000589638 A0A1B0GTL3 188 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 TRIM38O00635 465 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 GIPC1O14908 333 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 PPM1DO15297 605 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 CRCPO75575 148 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 EPORP19235 508 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 DRD4P21917 467 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 PSMB5P28074 263 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 FASLGP48023 281 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 SH3BP2P78314 561 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 PRKAA1Q13131 559 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 SF3A2Q15428 464 aaKnown RBP17.09■□□□□ 0.33
TMED1-205ENST00000589638 SH2D4BQ5SQS7 431 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.09■□□□□ 0.33
TMED1-205ENST00000589638 GPRIN3Q6ZVF9 776 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 C17orf82Q86X59 251 aaPredicted RBP17.09■□□□□ 0.33
TMED1-205ENST00000589638 SLC35F3Q8IY50 421 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 AVL9Q8NBF6 648 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 AGAP11Q8TF27 550 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 SLC38A3Q99624 504 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 DUSP23Q9BVJ7 150 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 ILKAPQ9H0C8 392 aaPredicted RBP17.09■□□□□ 0.33
TMED1-205ENST00000589638 NSRP1Q9H0G5 558 aaKnown RBP17.09■□□□□ 0.33
TMED1-205ENST00000589638 EPN3Q9H201 632 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 SPHK1Q9NYA1 384 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 TAC3Q9UHF0 121 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 ZDHHC2Q9UIJ5 367 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 SH2B3Q9UQQ2 575 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 RAP2CQ9Y3L5 183 aa17.09■□□□□ 0.33
TMED1-205ENST00000589638 TP53BP1Q12888 1972 aaPredicted RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms