RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GRM2Q14416 872 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 STARD3Q14849 445 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 TRIP10Q15642 601 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 CST6Q15828 149 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 FXNQ16595 210 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 MAPKAPK3Q16644 382 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 HIST2H2ACQ16777 129 aaPredicted RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 USP39Q53GS9 565 aaKnown RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 PAGE2BQ5JRK9 111 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 HIST2H2AA3Q6FI13 130 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 KIAA1161Q6NSJ0 714 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 NANOGP8Q6NSW7 305 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 MBOAT1Q6ZNC8 495 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 PDSS2Q86YH6 399 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 TRAPPC5Q8IUR0 188 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 CHPFQ8IZ52 775 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ZNF513Q8N8E2 541 aaPredicted RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 DCBLD1Q8N8Z6 715 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 OR9A1PQ8NGU1 263 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 NAT14Q8WUY8 206 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ASB12Q8WXK4 309 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 TMEM125Q96AQ2 219 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 WDR34Q96EX3 536 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 FCRL1Q96LA6 429 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ZNF570Q96NI8 536 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 UHRF1Q96T88 793 aaPredicted RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 PKP4Q99569 1192 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 EFCAB11Q9BUY7 163 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 C1orf50Q9BV19 199 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 OR2AG1Q9H205 316 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ALG2Q9H553 416 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 CLMPQ9H6B4 373 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 NANOGQ9H9S0 305 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 CCM2LQ9NUG4 571 aaPredicted RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 CMTM6Q9NX76 183 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ATXN10Q9UBB4 475 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ADGRE2Q9UHX3 823 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ITM2BQ9Y287 266 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 TSC22D4Q9Y3Q8 395 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 DYRK1BQ9Y463 629 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 POLR3HQ9Y535 204 aaPredicted RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 PIEZO1Q92508 2521 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 PLXNA2O75051 1894 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 MAGEA13PA6NCF6 341 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 EPOPA6NHQ4 379 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 TNFRSF10AO00220 468 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 NME4O00746 187 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 KMOO15229 486 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 C7P10643 843 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 TCN1P20061 433 aaPredicted RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 PRPS1L1P21108 318 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 KELP23276 732 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 ITPKAP23677 461 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 IMPA1P29218 277 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 IL12AP29459 219 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 C21orf58P58505 322 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 RPS21P63220 83 aaKnown RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 PHEXP78562 749 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 SRSF11Q05519 484 aaKnown RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 MESP2Q0VG99 397 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 NAE1Q13564 534 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 ARHGAP19Q14CB8 494 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 SGO1Q5FBB7 561 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 XKR6Q5GH73 641 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 PAGE3Q5JUK9 113 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 ZNF648Q5T619 568 aaPredicted RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 EGFLAMQ63HQ2 1017 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 PARM1Q6UWI2 310 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 IZUMO2Q6UXV1 221 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 LRRTM4Q86VH4 590 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 AMZ2Q86W34 360 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 LIX1Q8N485 282 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 RAB42Q8N4Z0 105 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 RNF148Q8N7C7 305 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 OR52E4Q8NGH9 312 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 WDR20Q8TBZ3 569 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 SLC13A3Q8WWT9 602 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 FAM131CQ96AQ9 280 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 VPS33AQ96AX1 596 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 TESCQ96BS2 214 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 TEX37Q96LM6 180 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 CGREF1Q99674 301 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 GABRG3Q99928 467 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 KCTD14Q9BQ13 255 aaPredicted RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 ACPTQ9BZG2 426 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 PCBD2Q9H0N5 130 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 ATG10Q9H0Y0 220 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 KCNH6Q9H252 994 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 ACTL8Q9H568 366 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 C8orf33Q9H7E9 229 aaPredicted RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 PHPT1Q9NRX4 125 aaPredicted RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 INTS7Q9NVH2 962 aaKnown RBP10.09□□□□□ -0.79
VPS25-203ENST00000589520 SIRT5Q9NXA8 310 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 CLEC1BQ9P126 229 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 VPS29Q9UBQ0 182 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 ZNHIT2Q9UHR6 403 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 MAGEL2Q9UJ55 1249 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 ACSL5Q9ULC5 683 aa10.09□□□□□ -0.79
VPS25-203ENST00000589520 RAB26Q9ULW5 256 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms