RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 HDAC10Q969S8 669 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 RAB11FIP5Q9BXF6 653 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 PLAGL1Q9UM63 463 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 KLK4Q9Y5K2 254 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 MRFAP1Q9Y605 127 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 NUP210LQ5VU65 1888 aa13.41□□□□□ -0.26
VMP1-209ENST00000588915 SNRNP200O75643 2136 aaKnown RBP13.4□□□□□ -0.26
VMP1-209ENST00000588915 DIDO1Q9BTC0 2240 aaKnown RBP13.4□□□□□ -0.26
VMP1-209ENST00000588915 A0A1B0GUH1 482 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 E2F3O00716 465 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 RASGRF2O14827 1237 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 HNRNPRO43390 633 aaKnown RBP13.4□□□□□ -0.26
VMP1-209ENST00000588915 PRICKLE3O43900 615 aaPredicted RBP13.4□□□□□ -0.26
VMP1-209ENST00000588915 SUN1O94901 812 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 SLCO2B1O94956 709 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 IPO7O95373 1038 aaKnown RBP13.4□□□□□ -0.26
VMP1-209ENST00000588915 STSP08842 583 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
VMP1-209ENST00000588915 CCR7P32248 378 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 FOXL2P58012 376 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 HSPA14Q0VDF9 509 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 CDC16Q13042 620 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 KLF1Q13351 362 aaPredicted RBP13.4□□□□□ -0.26
VMP1-209ENST00000588915 GRB7Q14451 532 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 ZRSR2Q15696 482 aaKnown RBP13.4□□□□□ -0.26
VMP1-209ENST00000588915 RBBP7Q16576 425 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 HIF1AQ16665 826 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 TTC23LQ6PF05 361 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 ISLR2Q6UXK2 745 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 NAPRTQ6XQN6 538 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 COX15Q7KZN9 410 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 PARP9Q8IXQ6 854 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 DNAAF3Q8N9W5 541 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 LMNTD1Q8N9Z9 388 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 OR13J1Q8NGT2 312 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 OR4L1Q8NH43 312 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 SLC35B2Q8TB61 432 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 GRHL3Q8TE85 626 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 RAD51AP1Q96B01 352 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 TSPY26PQ9H489 355 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 IMPACTQ9P2X3 320 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 AMFRQ9UKV5 643 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 SLC39A10Q9ULF5 831 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 OSGIN2Q9Y236 505 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 CSAG2Q9Y5P2 127 aa13.4□□□□□ -0.26
VMP1-209ENST00000588915 ABCA12Q86UK0 2595 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 RCCD1A6NED2 376 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 OR51F1A6NGY5 319 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 MIF4GDA9UHW6 222 aaKnown RBP13.39□□□□□ -0.27
VMP1-209ENST00000588915 OR1I1O60431 355 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 GOT2P00505 430 aaKnown RBP13.39□□□□□ -0.27
VMP1-209ENST00000588915 PTMAP06454 111 aaKnown RBP13.39□□□□□ -0.27
VMP1-209ENST00000588915 APOA4P06727 396 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 FDXRP22570 491 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 ADRA1DP25100 572 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 MFAP5Q13361 173 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 FASTKD1Q53R41 847 aaKnown RBP13.39□□□□□ -0.27
VMP1-209ENST00000588915 AARS2Q5JTZ9 985 aaKnown RBP13.39□□□□□ -0.27
VMP1-209ENST00000588915 TSTD2Q5T7W7 516 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 AADACL2Q6P093 401 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 PRMT9Q6P2P2 845 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 MICALCLQ6ZW33 695 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 FAM20CQ8IXL6 584 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 RAB42Q8N4Z0 105 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 UBL4BQ8N7F7 174 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 LRRC57Q8N9N7 239 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 OR11G2Q8NGC1 345 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 OR52K1Q8NGK4 314 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 HMGCLL1Q8TB92 370 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 SLX1AQ9BQ83 275 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 SELENOSQ9BQE4 189 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
VMP1-209ENST00000588915 RUBCNLQ9H714 662 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 ANAPC5Q9UJX4 755 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 DUSP10Q9Y6W6 482 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 LRBAP50851 2863 aa13.39□□□□□ -0.27
VMP1-209ENST00000588915 PCDH17O14917 1159 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 KPNA5O15131 536 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 HPP00738 406 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 AOAHP28039 575 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 FDFT1P37268 417 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 GRIA3P42263 894 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 EMP3P54852 163 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 OCA2Q04671 838 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 NAA25Q14CX7 972 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 CCDC38Q502W7 563 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 ATG9BQ674R7 924 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 FAM180AQ6UWF9 173 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 ZNF534Q76KX8 674 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 VRK3Q8IV63 474 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 SYCE1Q8N0S2 351 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 BCORP1Q8N888 145 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 THOC3Q96J01 351 aaKnown RBP13.38□□□□□ -0.27
VMP1-209ENST00000588915 PANX2Q96RD6 677 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 TMEM121Q9BTD3 319 aa13.38□□□□□ -0.27
VMP1-209ENST00000588915 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
VMP1-209ENST00000588915 ZNF304Q9HCX3 659 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms