RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SELENOSQ9BQE4 189 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 RAB6BQ9NRW1 208 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 SLC22A11Q9NSA0 550 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 CUTCQ9NTM9 273 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 CATSPERZQ9NTU4 200 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 ZNF148Q9UQR1 794 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 RUVBL2Q9Y230 463 aaKnown RBP13.16□□□□□ -0.3
HDAC5-208ENST00000588419 TCAF1Q9Y4C2 921 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 CAPN6Q9Y6Q1 641 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 MAU2Q9Y6X3 613 aa13.16□□□□□ -0.3
HDAC5-208ENST00000588419 DIDO1Q9BTC0 2240 aaKnown RBP13.15□□□□□ -0.3
HDAC5-208ENST00000588419 DSCR3O14972 297 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 CLDN1O95832 211 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 S1PR4O95977 384 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 APRTP07741 180 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 PIM1P11309 404 aaPredicted RBP13.15□□□□□ -0.3
HDAC5-208ENST00000588419 ITGAXP20702 1163 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 ADRA1DP25100 572 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 PPARGP37231 505 aaPredicted RBP13.15□□□□□ -0.3
HDAC5-208ENST00000588419 FDFT1P37268 417 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 OR1D4P47884 311 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 VSX2P58304 361 aaPredicted RBP13.15□□□□□ -0.3
HDAC5-208ENST00000588419 AIMP2Q13155 320 aaKnown RBP13.15□□□□□ -0.3
HDAC5-208ENST00000588419 PRAMEF13Q5VWM6 474 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 FCRL6Q6DN72 434 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 FIGLAQ6QHK4 219 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 ZNF534Q76KX8 674 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 MAMDC2Q7Z304 686 aaPredicted RBP13.15□□□□□ -0.3
HDAC5-208ENST00000588419 CUZD1Q86UP6 607 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 C1orf54Q8WWF1 131 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 ASZ1Q8WWH4 475 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 SLC22A18Q96BI1 424 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 RANBP9Q96S59 729 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 MIPEPQ99797 713 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 WDR77Q9BQA1 342 aaPredicted RBP13.15□□□□□ -0.3
HDAC5-208ENST00000588419 CHRNA10Q9GZZ6 450 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 CTSFQ9UBX1 484 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 SLC5A6Q9Y289 635 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 NTNG1Q9Y2I2 539 aa13.15□□□□□ -0.3
HDAC5-208ENST00000588419 ERI2A8K979 691 aaKnown RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 SOCS6O14544 535 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 RASGRF2O14827 1237 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 LIASO43766 372 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 CBX6O95503 412 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 EIF2S1P05198 315 aaKnown RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 UQCRHP07919 91 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 MMP11P24347 488 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 TERF1P54274 439 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 EIF3BP55884 814 aaKnown RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 SESN2P58004 480 aaPredicted RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 CRADDP78560 199 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 TSTA3Q13630 321 aaPredicted RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 GRM7Q14831 915 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 NKG7Q16617 165 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 TUBB8Q3ZCM7 444 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 ZC3H12BQ5HYM0 836 aaKnown RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 AARS2Q5JTZ9 985 aaKnown RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 CNSTQ6PJW8 725 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 UNC5DQ6UXZ4 953 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 COX15Q7KZN9 410 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 TXLNBQ8N3L3 684 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 OR2L8Q8NGY9 312 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 FKBP10Q96AY3 582 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 AGPAT4Q9NRZ5 378 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 MARCH4Q9P2E8 410 aaPredicted RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 GNPTGQ9UJJ9 305 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 TTC7AQ9ULT0 858 aaPredicted RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 NOVA2Q9UNW9 492 aaKnown RBP13.14□□□□□ -0.31
HDAC5-208ENST00000588419 PCDHGA10Q9Y5H3 936 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 NFS1Q9Y697 457 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 FAM169AQ9Y6X4 670 aa13.14□□□□□ -0.31
HDAC5-208ENST00000588419 CPAMD8Q8IZJ3 1885 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 A0A0J9YVX5 310 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 PRMT5O14744 637 aaPredicted RBP13.13□□□□□ -0.31
HDAC5-208ENST00000588419 NRP2O60462 931 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 SUN1O94901 812 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 LDLRP01130 860 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 ZSCAN5DPP0CG00 497 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 PSMA3P25788 255 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 BASP1P80723 227 aaKnown RBP13.13□□□□□ -0.31
HDAC5-208ENST00000588419 CDC16Q13042 620 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 GRB7Q14451 532 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 CCSMST1Q4G0I0 132 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 AGAP7PQ5VUJ5 663 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 IGFL3Q6UXB1 125 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 LINC00696Q6ZRV3 163 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 Q6ZS92 163 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 OVCH1Q7RTY7 1134 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 DNAJB14Q8TBM8 379 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 DENND1AQ8TEH3 1009 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 UBE2Q2Q8WVN8 375 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 FAM136AQ96C01 138 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 THOC3Q96J01 351 aaKnown RBP13.13□□□□□ -0.31
HDAC5-208ENST00000588419 AGAP4Q96P64 663 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 PANX3Q96QZ0 392 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms