RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TSTA3Q13630 321 aaPredicted RBP10.95□□□□□ -0.66
VMP1-207ENST00000588131 ARHGAP19Q14CB8 494 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 ZNF423Q2M1K9 1284 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 DEFB133Q30KQ1 61 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 PRAMEF9Q5VWM5 478 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 CLEC6AQ6EIG7 209 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 CAPN13Q6MZZ7 669 aaPredicted RBP10.95□□□□□ -0.66
VMP1-207ENST00000588131 LETMD1Q6P1Q0 360 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 GPRIN3Q6ZVF9 776 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 GKN2Q86XP6 184 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 WDR75Q8IWA0 830 aaKnown RBP10.95□□□□□ -0.66
VMP1-207ENST00000588131 SFRP1Q8N474 314 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 LINC01555Q8NAE3 123 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 OR4F6Q8NGB9 312 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 C10orf82Q8WW14 230 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 ELF4Q99607 663 aaPredicted RBP10.95□□□□□ -0.66
VMP1-207ENST00000588131 SGPP1Q9BX95 441 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 TRIM55Q9BYV6 548 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 KCNK13Q9HB14 408 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 KLHL14Q9P2G3 628 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 DCTN4Q9UJW0 460 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 USH1CQ9Y6N9 552 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 COLEC10Q9Y6Z7 277 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 USP34Q70CQ2 3546 aa10.95□□□□□ -0.66
VMP1-207ENST00000588131 BDP1A6H8Y1 2624 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 PCDH15Q96QU1 1955 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 KIR2DS5A0A0G2JLQ3 304 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 A0A0G2JNG1 304 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 A0A1W2PPV9 198 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 OR5K4A6NMS3 321 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 E7EQ34 232 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 LMO7DNF2Z398 122 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 KIR2DS3K7RE56 304 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 MATN2O00339 956 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 AZIN1O14977 448 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 RRP9O43818 475 aaKnown RBP10.94□□□□□ -0.66
VMP1-207ENST00000588131 NOBOXO60393 691 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 KATNA1O75449 491 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 ESRRBO95718 433 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 OTCP00480 354 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 VIPP01282 170 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 FGF4P08620 206 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 ALOX15P16050 662 aaPredicted RBP10.94□□□□□ -0.66
VMP1-207ENST00000588131 NDUFS1P28331 727 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 SERPINB3P29508 390 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 HOXD12P35452 270 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 RXRGP48443 463 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 PIK3CGP48736 1102 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 RAB28P51157 221 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 CCNG1P51959 295 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 AQP5P55064 265 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 PKNOX1P55347 436 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 MAZP56270 477 aaKnown RBP10.94□□□□□ -0.66
VMP1-207ENST00000588131 GPR18Q14330 331 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 KIR2DS5Q14953 304 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 CCDC6Q16204 474 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 DUOXA1Q1HG43 343 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 UGT3A2Q3SY77 523 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 TCHHL1Q5QJ38 904 aaPredicted RBP10.94□□□□□ -0.66
VMP1-207ENST00000588131 VWA5B1Q5TIE3 1220 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 PRAMEF13Q5VWM6 474 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 KANK2Q63ZY3 851 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 TRIM48Q8IWZ4 208 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 SLC25A45Q8N413 288 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 OR2L8Q8NGY9 312 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 MAPK15Q8TD08 544 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 ATP6V1E2Q96A05 226 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 NTMT1Q9BV86 223 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 TMEM120AQ9BXJ8 343 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 IL21RQ9HBE5 538 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 CAPN10Q9HC96 672 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 SLC40A1Q9NP59 571 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 CCDC177Q9NQR7 707 aaPredicted RBP10.94□□□□□ -0.66
VMP1-207ENST00000588131 POT1Q9NUX5 634 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 CPNE7Q9UBL6 633 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 LNPEPQ9UIQ6 1025 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 DOLKQ9UPQ8 538 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 RNF11Q9Y3C5 154 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 TRAF6Q9Y4K3 522 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 TIMM22Q9Y584 194 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 NCOR1O75376 2440 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 ADAMTS9Q9P2N4 1935 aa10.94□□□□□ -0.66
VMP1-207ENST00000588131 A0A0G2JND7 137 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 A0A1B0GTQ1 180 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 SKAP2O75563 359 aaPredicted RBP10.93□□□□□ -0.66
VMP1-207ENST00000588131 EPN2O95208 641 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 CAPN1P07384 714 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 ANXA6P08133 673 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 EBLN1P0CF75 366 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 GIMD1P0DJR0 217 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 SLC2A4P14672 509 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 NPPBP16860 134 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 PSMB5P28074 263 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 EPHA8P29322 1005 aaPredicted RBP10.93□□□□□ -0.66
VMP1-207ENST00000588131 PEBP1P30086 187 aaKnown RBP10.93□□□□□ -0.66
VMP1-207ENST00000588131 HSD17B2P37059 387 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 ARL1P40616 181 aaPredicted RBP10.93□□□□□ -0.66
VMP1-207ENST00000588131 DPP6P42658 865 aa10.93□□□□□ -0.66
VMP1-207ENST00000588131 YBX1P67809 324 aaKnown RBP10.93□□□□□ -0.66
VMP1-207ENST00000588131 BTKQ06187 659 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms