RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 GRIA3P42263 894 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 CSE1LP55060 971 aaKnown RBP13.47□□□□□ -0.25
DNMT1-213ENST00000587604 HSPA14Q0VDF9 509 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 CDC16Q13042 620 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 GRB7Q14451 532 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-213ENST00000587604 FAM214AQ32MH5 1076 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 FCRL6Q6DN72 434 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 FIGLAQ6QHK4 219 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 PARP9Q8IXQ6 854 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 C2orf73Q8N5S3 287 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-213ENST00000587604 RNF214Q8ND24 703 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 OR2L8Q8NGY9 312 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-213ENST00000587604 HDAC10Q969S8 669 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 ZUFSPQ96AP4 578 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 ZNF285Q96NJ3 590 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 LMF1Q96S06 567 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 CARD6Q9BX69 1037 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 EPS8L2Q9H6S3 715 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 OSGIN2Q9Y236 505 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 EPN1Q9Y6I3 576 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-213ENST00000587604 APCP25054 2843 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 PCNX1Q96RV3 2341 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 HEATR9A2RTY3 570 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 FITM1A5D6W6 292 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 VSTM2BA6NLU5 285 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 ERI2A8K979 691 aaKnown RBP13.46□□□□□ -0.25
DNMT1-213ENST00000587604 TARM1B6A8C7 271 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 FKBP9O95302 570 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 GAS8O95995 478 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 MCM3P25205 808 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 TNFRSF8P28908 595 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 PPARGP37231 505 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-213ENST00000587604 GDF10P55107 478 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 CDH17Q12864 832 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 SF1Q15637 639 aaKnown RBP13.46□□□□□ -0.25
DNMT1-213ENST00000587604 ZRSR2Q15696 482 aaKnown RBP13.46□□□□□ -0.25
DNMT1-213ENST00000587604 RBBP7Q16576 425 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 TUBB8Q3ZCM7 444 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 AFTPHQ6ULP2 937 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 ISLR2Q6UXK2 745 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 UNC5DQ6UXZ4 953 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 SHISA6Q6ZSJ9 500 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 VRK3Q8IV63 474 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 DCUN1D3Q8IWE4 304 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 LRRC57Q8N9N7 239 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 DNAAF3Q8N9W5 541 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 LMNTD1Q8N9Z9 388 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 TTC29Q8NA56 475 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-213ENST00000587604 OR11G2Q8NGC1 345 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 OR52K1Q8NGK4 314 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 OR4L1Q8NH43 312 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 CFAP61Q8NHU2 1237 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 SLC35B2Q8TB61 432 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 THOC3Q96J01 351 aaKnown RBP13.46□□□□□ -0.25
DNMT1-213ENST00000587604 SELENOSQ9BQE4 189 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 TMEM121Q9BTD3 319 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 TSSK1BQ9BXA7 367 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 SOX17Q9H6I2 414 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-213ENST00000587604 CTSFQ9UBX1 484 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 RIMKLBQ9ULI2 386 aa13.46□□□□□ -0.25
DNMT1-213ENST00000587604 RASGRF2O14827 1237 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 HNRNPRO43390 633 aaKnown RBP13.45□□□□□ -0.26
DNMT1-213ENST00000587604 PRICKLE3O43900 615 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-213ENST00000587604 SRPX2O60687 465 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-213ENST00000587604 SLCO2B1O94956 709 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 APOA4P06727 396 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 ADRA1DP25100 572 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 OR1D4P47884 311 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 ACVR1Q04771 509 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 Q0VFX4 171 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 KLF1Q13351 362 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-213ENST00000587604 SKOR2Q2VWA4 1001 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-213ENST00000587604 TSTD2Q5T7W7 516 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 RPUSD3Q6P087 351 aaKnown RBP13.45□□□□□ -0.26
DNMT1-213ENST00000587604 SRRM1Q8IYB3 904 aaKnown RBP13.45□□□□□ -0.26
DNMT1-213ENST00000587604 TAB3Q8N5C8 712 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-213ENST00000587604 OR6P1Q8NGX9 317 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 CNDP1Q96KN2 507 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 IL17FQ96PD4 163 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 SLC2A6Q9UGQ3 507 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 CIDEBQ9UHD4 219 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 SLC39A10Q9ULF5 831 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 ENTPD4Q9Y227 616 aa13.45□□□□□ -0.26
DNMT1-213ENST00000587604 PKDREJQ9NTG1 2253 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 HEATR5BQ9P2D3 2071 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 POLQO75417 2590 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 A0A1B0GUH1 482 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 HYKKA2RU49 373 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 GRID2IPA4D2P6 1211 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 IQCF5A8MTL0 148 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 SUN1O94901 812 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 IPO7O95373 1038 aaKnown RBP13.44□□□□□ -0.26
DNMT1-213ENST00000587604 HPP00738 406 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 STSP08842 583 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 AOAHP28039 575 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 STIP1P31948 543 aaKnown RBP13.44□□□□□ -0.26
DNMT1-213ENST00000587604 CARSP49589 748 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms