RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PLTPP55058 493 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 CDKN2DP55273 166 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 CAV1Q03135 178 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
ATG4D-207ENST00000587256 FRG1Q14331 258 aaKnown RBP14.28□□□□□ -0.12
ATG4D-207ENST00000587256 PRAMEF17Q5VTA0 474 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 CCDC25Q86WR0 208 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 SPNS2Q8IVW8 549 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 MYO1HQ8N1T3 1032 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 OR9A1PQ8NGU1 263 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 HMGCLL1Q8TB92 370 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 PYROXD1Q8WU10 500 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 CT55Q8WUE5 264 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 MR1Q95460 341 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 MIPEPQ99797 713 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 ACTR5Q9H9F9 607 aaPredicted RBP14.28□□□□□ -0.12
ATG4D-207ENST00000587256 FAM60AQ9NP50 221 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 IL17BQ9UHF5 180 aa14.28□□□□□ -0.12
ATG4D-207ENST00000587256 CORO1CQ9ULV4 474 aaPredicted RBP14.28□□□□□ -0.12
ATG4D-207ENST00000587256 MGAQ8IWI9 3026 aa14.27□□□□□ -0.12
ATG4D-207ENST00000587256 ZNF839A8K0R7 811 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 EIF3HO15372 352 aaKnown RBP eCLIP14.27□□□□□ -0.13
ATG4D-207ENST00000587256 KATNA1O75449 491 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 OR2B3O76000 313 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 FKBP9O95302 570 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 KLK3P07288 261 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-207ENST00000587256 PRKAR1AP10644 381 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 TCN2P20062 427 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 RPA3P35244 121 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-207ENST00000587256 SKIV2L2P42285 1042 aaKnown RBP14.27□□□□□ -0.13
ATG4D-207ENST00000587256 MC1RQ01726 317 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 GPS2Q13227 327 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 DNASE1L3Q13609 305 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 SOWAHCQ53LP3 525 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-207ENST00000587256 HECTD2Q5U5R9 776 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 FAM45BPQ6NSW5 357 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 UBE2R2Q712K3 238 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-207ENST00000587256 STRA8Q7Z7C7 330 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 PALM2Q8IXS6 379 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 FAM45AQ8TCE6 357 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 SMPDL3AQ92484 453 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 LINGO1Q96FE5 620 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 BBC3Q96PG8 261 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-207ENST00000587256 PKP4Q99569 1192 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 ARHGAP9Q9BRR9 750 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 SLC12A9Q9BXP2 914 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 CHRNA10Q9GZZ6 450 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 NSMCE4AQ9NXX6 385 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 KCND3Q9UK17 655 aa14.27□□□□□ -0.13
ATG4D-207ENST00000587256 MRPS18BQ9Y676 258 aaKnown RBP14.27□□□□□ -0.13
ATG4D-207ENST00000587256 ESYT3A0FGR9 886 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 PABPN1LA6NDY0 278 aaKnown RBP14.26□□□□□ -0.13
ATG4D-207ENST00000587256 ZSCAN9O15535 394 aaPredicted RBP14.26□□□□□ -0.13
ATG4D-207ENST00000587256 ZBTB14O43829 449 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 TUBB4AP04350 444 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 ITGB2P05107 769 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 PNLIPRP1P54315 467 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 CDC20Q12834 499 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 SP140Q13342 867 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 FASTKQ14296 549 aaKnown RBP14.26□□□□□ -0.13
ATG4D-207ENST00000587256 ARHGAP19Q14CB8 494 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 CYP2A13Q16696 494 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 C16orf46Q6P387 395 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 FAM199XQ6PEV8 388 aaPredicted RBP14.26□□□□□ -0.13
ATG4D-207ENST00000587256 PAQR3Q6TCH7 311 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 SLC26A11Q86WA9 606 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 SYTL1Q8IYJ3 562 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 FBXO15Q8NCQ5 510 aaPredicted RBP14.26□□□□□ -0.13
ATG4D-207ENST00000587256 MNS1Q8NEH6 495 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 FBXO25Q8TCJ0 367 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 EEF1AKMT1Q8WVE0 214 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 ASB11Q8WXH4 323 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 TTC9Q92623 222 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 CDKL2Q92772 493 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 EXTL1Q92935 676 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 ACAT2Q9BWD1 397 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 ABCF3Q9NUQ8 709 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 TXNDC16Q9P2K2 825 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 PLCL2Q9UPR0 1127 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 PSAT1Q9Y617 370 aa14.26□□□□□ -0.13
ATG4D-207ENST00000587256 C21orf140B9A014 251 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 MEN1O00255 615 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 NKX2-8O15522 239 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 ZNF749O43361 778 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 HCRTR1O43613 425 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 SNRNP200O75643 2136 aaKnown RBP14.25□□□□□ -0.13
ATG4D-207ENST00000587256 SLC16A8O95907 504 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 C8GP07360 202 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 HBQ1P09105 142 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 ERGP11308 486 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 SAT1P21673 171 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 FDXRP22570 491 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 F8A1P23610 371 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 CMPK1P30085 196 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 SSTR1P30872 391 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 HSD17B2P37059 387 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 GABRA4P48169 554 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 SLC7A5Q01650 507 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 NAA25Q14CX7 972 aa14.25□□□□□ -0.13
ATG4D-207ENST00000587256 ZC3H12BQ5HYM0 836 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms