RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 RP1P56715 2156 aa16.42■□□□□ 0.22
PRKCSH-203ENST00000586486 A0A1W2PPV9 198 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 H3BQF6 201 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 MATN2O00339 956 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 B4GAT1O43505 415 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 DLX3O60479 287 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PROS1P07225 676 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 CHRM5P08912 532 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 ALDH4A1P30038 563 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 HPDP32754 393 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 ACADVLP49748 655 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 TBPL1P62380 186 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 SQSTM1Q13501 440 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 FASTKQ14296 549 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PCLAFQ15004 111 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PCBP2Q15366 365 aaKnown RBP eCLIP16.41■□□□□ 0.221e-37■■■□□ 18.1
PRKCSH-203ENST00000586486 PTGR2Q8N8N7 351 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 RSC1A1Q92681 617 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 SELENOSQ9BQE4 189 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 CCDC3Q9BQI4 270 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 C1QTNF3Q9BXJ4 246 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 CCDC177Q9NQR7 707 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 NKIRAS1Q9NYS0 192 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 TNPO3Q9Y5L0 923 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 ASXL3Q9C0F0 2248 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 OR6C74A6NCV1 312 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 BTN3A3O00478 584 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 TM4SF5O14894 197 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 DUX1O43812 170 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PRICKLE3O43900 615 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 CSRP1P21291 193 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PRKAA2P54646 552 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 OR1D5P58170 312 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PPP2R2AP63151 447 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 ILKQ13418 452 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 NAE1Q13564 534 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 KIR2DS3Q14952 304 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 CLPPQ16740 277 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PTCHD3Q3KNS1 767 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 CAPN13Q6MZZ7 669 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 LRRC70Q7Z2Q7 622 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PPFIBP2Q8ND30 876 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 SLC22A18Q96BI1 424 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 CD244Q9BZW8 370 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 ATG10Q9H0Y0 220 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 OXSMQ9NWU1 459 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 HRASLS2Q9NWW9 162 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 EPHA6Q9UF33 1036 aa16.41■□□□□ 0.22
PRKCSH-203ENST00000586486 PIPSLA2A3N6 862 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 C2orf74A8MZ97 194 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 STK16O75716 305 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 AMD1P17707 334 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 NR1D1P20393 614 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 CD1CP29017 333 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 PEBP1P30086 187 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 SERPINB4P48594 390 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 DNAJB13P59910 316 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 HERVK_113P63132 956 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 PRKAA1Q13131 559 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 ANKRD42Q8N9B4 389 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 Q8N9G6 341 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 PHF21BQ96EK2 531 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 L3HYPDHQ96EM0 354 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 ERVK-6Q9BXR3 956 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 PCBD2Q9H0N5 130 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 SLC32A1Q9H598 525 aa16.4■□□□□ 0.22
PRKCSH-203ENST00000586486 MN1Q10571 1320 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 SLC30A4O14863 429 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 BIRC5O15392 142 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 BPGMP07738 259 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 RPS17P08708 135 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 TYRP1P17643 537 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 OAS2P29728 719 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 HSPA7P48741 367 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 AGTR2P50052 363 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 C18orf21Q32NC0 220 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 PRAMEF13Q5VWM6 474 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 LIPMQ5VYY2 423 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 WDR74Q6RFH5 385 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 RAB44Q7Z6P3 723 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 LMNTD1Q8N9Z9 388 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 WDR48Q8TAF3 677 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 FLVCR1-AS1Q8TAF5 88 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 PYCR2Q96C36 320 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 MED8Q96G25 268 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 AHCYL2Q96HN2 611 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 TMEM237Q96Q45 408 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 MIPEPQ99797 713 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 LRRN3Q9H3W5 708 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 INTS7Q9NVH2 962 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 SPHK1Q9NYA1 384 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 ACTR10Q9NZ32 417 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 POMT2Q9UKY4 750 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 ASB1Q9Y576 335 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 PCDHB11Q9Y5F2 797 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 PCDHGA1Q9Y5H4 931 aa16.39■□□□□ 0.21
PRKCSH-203ENST00000586486 A0A1W2PQM1 296 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 K7EPI3 171 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 FKBP9O95302 570 aa16.38■□□□□ 0.21
PRKCSH-203ENST00000586486 SIX3O95343 332 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms