RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 SERPINB1P30740 379 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SHMT2P34897 504 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SLC6A12P48065 614 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 KCNC1P48547 511 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PFN3P60673 137 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 RACK1P63244 317 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 SH3BP2P78314 561 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CTBSQ01459 385 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CSTF3Q12996 717 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 MTAPQ13126 283 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CHIT1Q13231 466 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 NAE1Q13564 534 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 ELOCQ15369 112 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 GSTA3Q16772 222 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 UAP1L1Q3KQV9 507 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 MMEL1Q495T6 779 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 GALNTL6Q49A17 601 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 DNAL1Q4LDG9 190 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SLC9B1Q4ZJI4 515 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 TMEM31Q5JXX7 168 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 VWA5B1Q5TIE3 1220 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CACHD1Q5VU97 1274 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 FAM91A1Q658Y4 838 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 GRHL2Q6ISB3 625 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SLC30A9Q6PML9 568 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 LCTLQ6UWM7 567 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 MBOAT1Q6ZNC8 495 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 RPS27LQ71UM5 84 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 SPATA19Q7Z5L4 167 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 ADCK2Q7Z695 626 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 RABEPKQ7Z6M1 372 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 ABI3BPQ7Z7G0 1075 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 C11orf96Q7Z7L8 435 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 TMPRSS11BQ86T26 416 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SYVN1Q86TM6 617 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 C17orf64Q86WR6 236 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 GKN2Q86XP6 184 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 LSMEM2Q8N112 164 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 MIER2Q8N344 545 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 FITM2Q8N6M3 262 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 MFSD2AQ8NA29 543 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 FNDC5Q8NAU1 212 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 TMEM145Q8NBT3 493 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 OR13H1Q8NG92 308 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 OR52B6Q8NGF0 335 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 OR5AR1Q8NGP9 310 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SETD7Q8WTS6 366 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 SELENOMQ8WWX9 145 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 RLN3Q8WXF3 142 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SMPDL3AQ92484 453 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 STARD8Q92502 1023 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 ESAMQ96AP7 390 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SLC22A18Q96BI1 424 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PYCR2Q96C36 320 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 KLHL29Q96CT2 875 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PTCD3Q96EY7 689 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 HSPA12BQ96MM6 686 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CATSPER2Q96P56 530 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PKP4Q99569 1192 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 ZBTB18Q99592 522 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 NMUR2Q9GZQ4 415 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 ZNF395Q9H8N7 513 aaPredicted RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 FGF22Q9HCT0 170 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 CD93Q9NPY3 652 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 MRPL40Q9NQ50 206 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 ACSS2Q9NR19 701 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 POT1Q9NUX5 634 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 NOP53Q9NZM5 478 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 ADGRE2Q9UHX3 823 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 TAGLN3Q9UI15 199 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 ZNF490Q9ULM2 529 aaPredicted RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 MAPRE3Q9UPY8 281 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 EIF3LQ9Y262 564 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 SLC22A14Q9Y267 594 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 BTRCQ9Y297 605 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 PCDHGA11Q9Y5H2 935 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 DGKBQ9Y6T7 804 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 REV3LO60673 3130 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 SNRNP200O75643 2136 aaKnown RBP6.01□□□□□ -1.45
LIG3-206ENST00000586058 F5P12259 2224 aa6.01□□□□□ -1.45
LIG3-206ENST00000586058 C5orf42Q9H799 3197 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ARHGEF17Q96PE2 2063 aaPredicted RBP6□□□□□ -1.45
LIG3-206ENST00000586058 CROCCQ5TZA2 2017 aa6□□□□□ -1.45
LIG3-206ENST00000586058 KIR2DS5A0A0G2JLQ3 304 aa6□□□□□ -1.45
LIG3-206ENST00000586058 A0A0G2JNG1 304 aa6□□□□□ -1.45
LIG3-206ENST00000586058 SPTY2D1-AS1A0A0U1RR47 76 aa6□□□□□ -1.45
LIG3-206ENST00000586058 LRRC14BA6NHZ5 514 aa6□□□□□ -1.45
LIG3-206ENST00000586058 SHISA7A6NL88 538 aa6□□□□□ -1.45
LIG3-206ENST00000586058 BBIP1A8MTZ0 92 aa6□□□□□ -1.45
LIG3-206ENST00000586058 METTL12A8MUP2 240 aa6□□□□□ -1.45
LIG3-206ENST00000586058 KIR2DS3K7RE56 304 aa6□□□□□ -1.45
LIG3-206ENST00000586058 SDHDO14521 159 aa6□□□□□ -1.45
LIG3-206ENST00000586058 OR7A17O14581 309 aa6□□□□□ -1.45
LIG3-206ENST00000586058 FFAR3O14843 346 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ANGPT2O15123 496 aa6□□□□□ -1.45
LIG3-206ENST00000586058 GYG2O15488 501 aa6□□□□□ -1.45
LIG3-206ENST00000586058 GPR42O15529 346 aa6□□□□□ -1.45
LIG3-206ENST00000586058 TAPBPO15533 448 aa6□□□□□ -1.45
LIG3-206ENST00000586058 ZW10O43264 779 aa6□□□□□ -1.45
LIG3-206ENST00000586058 UNC5CO95185 931 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms