RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CYHR1Q6ZMK1 362 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 RNF165Q6ZSG1 346 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 UBE2R2Q712K3 238 aaPredicted RBP12.29□□□□□ -0.44
VMP1-202ENST00000585847 TAF8Q7Z7C8 310 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 PIP4P1Q86T03 277 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 PDZD3Q86UT5 571 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 GKN2Q86XP6 184 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 VRK3Q8IV63 474 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 NAGSQ8N159 534 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 SDR16C5Q8N3Y7 309 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 SPATA6LQ8N4H0 392 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 EID2Q8N6I1 236 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 OR4C6Q8NH72 309 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 CAMK1GQ96NX5 476 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 TMEM237Q96Q45 408 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 ELAC2Q9BQ52 826 aaKnown RBP12.29□□□□□ -0.44
VMP1-202ENST00000585847 RAB11FIP5Q9BXF6 653 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 NLGN3Q9NZ94 848 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 PCOLCE2Q9UKZ9 415 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 HEBP2Q9Y5Z4 205 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 GOLGA4Q13439 2230 aaKnown RBP12.29□□□□□ -0.44
VMP1-202ENST00000585847 ASXL3Q9C0F0 2248 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 RP1P56715 2156 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 C1QTNF9BB2RNN3 333 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 UBXN8O00124 270 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 MATN2O00339 956 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 SLC22A2O15244 555 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 SIGLEC6O43699 453 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 SH3BP5O60239 455 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 UGDHO60701 494 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 HNRNPCL1O60812 293 aaKnown RBP12.28□□□□□ -0.44
VMP1-202ENST00000585847 CCDC22O60826 627 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 SUPT7LO94864 414 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 OTCP00480 354 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
VMP1-202ENST00000585847 ANXA6P08133 673 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 C1QTNF9P0C862 333 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 NDUFS1P28331 727 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 RPIAP49247 311 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 ARFIP2P53365 341 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 PNLIPRP1P54315 467 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 ILF3Q12906 894 aaKnown RBP eCLIP12.28□□□□□ -0.44
VMP1-202ENST00000585847 CLCA4Q14CN2 919 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 PROX2Q3B8N5 592 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 UAP1L1Q3KQV9 507 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 ARL13AQ5H913 290 aaPredicted RBP12.28□□□□□ -0.44
VMP1-202ENST00000585847 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 FAM91A1Q658Y4 838 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 ABRAXAS1Q6UWZ7 409 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 WASH2PQ6VEQ5 465 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 SLC35F3Q8IY50 421 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 CFAP206Q8IYR0 622 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 CCNYL1Q8N7R7 359 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 AVL9Q8NBF6 648 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 GPR156Q8NFN8 814 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 ZNF483Q8TF39 744 aaPredicted RBP12.28□□□□□ -0.44
VMP1-202ENST00000585847 SKA2Q8WVK7 121 aaPredicted RBP12.28□□□□□ -0.44
VMP1-202ENST00000585847 FAM136AQ96C01 138 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 FBXL8Q96CD0 374 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 RMDN2Q96LZ7 410 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 ZNF382Q96SR6 550 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 SORT1Q99523 831 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 EGFL8Q99944 293 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 TUBB6Q9BUF5 446 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 OR52A5Q9H2C5 316 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 GSTO2Q9H4Y5 243 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 WASH6PQ9NQA3 447 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 ARL15Q9NXU5 204 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 WWOXQ9NZC7 414 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 PTBP2Q9UKA9 531 aaKnown RBP12.28□□□□□ -0.44
VMP1-202ENST00000585847 ZMIZ1Q9ULJ6 1067 aa12.28□□□□□ -0.44
VMP1-202ENST00000585847 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.44
VMP1-202ENST00000585847 PRAMEF33A0A0G2JMD5 474 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 K7EPI3 171 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 STK16O75716 305 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 KIAA0754O94854 1291 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 SLC35G4P0C7Q5 338 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 SLC2A4P14672 509 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 RPL10P27635 214 aaKnown RBP12.27□□□□□ -0.45
VMP1-202ENST00000585847 PREPP48147 710 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 MAZP56270 477 aaKnown RBP12.27□□□□□ -0.45
VMP1-202ENST00000585847 PCDH1Q08174 1060 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 CAPRIN2Q6IMN6 1127 aaKnown RBP12.27□□□□□ -0.45
VMP1-202ENST00000585847 IYDQ6PHW0 289 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 ZCCHC23Q6ZST2 131 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 CUZD1Q86UP6 607 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 NAXDQ8IW45 347 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 DCUN1D3Q8IWE4 304 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 CLYBLQ8N0X4 340 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 FAM181AQ8N9Y4 354 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 KYQ8NBH2 561 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 FAM46DQ8NEK8 389 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
VMP1-202ENST00000585847 ZDHHC1Q8WTX9 485 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 C10orf82Q8WW14 230 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 RHBDF1Q96CC6 855 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 PHF21BQ96EK2 531 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 CCDC28BQ9BUN5 200 aa12.27□□□□□ -0.45
VMP1-202ENST00000585847 OSGEPL1Q9H4B0 414 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms