RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GPRIN3Q6ZVF9 776 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 HOGA1Q86XE5 327 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 ZNF595Q8IYB9 648 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 LSMEM2Q8N112 164 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 MARVELD2Q8N4S9 558 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 NIPA2Q8N8Q9 360 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 EXD1Q8NHP7 514 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 AZIN2Q96A70 460 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 JAKMIP2Q96AA8 810 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 SLC22A18Q96BI1 424 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 TEX12Q9BXU0 123 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 DGCR6LQ9BY27 220 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 Q9N2K0 584 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 SLC35C2Q9NQQ7 365 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 GPR34Q9UPC5 381 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 LOC100509620A0A075B734 347 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 TMEM221A6NGB7 291 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 BCL2L11O43521 198 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 SH3BP5O60239 455 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 TOMM70O94826 608 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 DDHD2O94830 711 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 NXPH2O95156 264 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 TRIM49P0CI25 452 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 TRIM49CP0CI26 452 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 SMIM18P0DKX4 95 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 CAPN2P17655 700 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 CDH3P22223 829 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 EIF2DP41214 584 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 CLNS1AP54105 237 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 HERV-K104P61576 105 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 TAF10Q12962 218 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 DRP2Q13474 957 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 NTRK2Q16620 822 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 ODF4Q2M2E3 257 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 C15orf59Q2T9L4 293 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 HLA-BQ31612 363 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 FASTKD1Q53R41 847 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 SLC25A30Q5SVS4 291 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 BTN2A1Q7KYR7 527 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 TMPRSS11BQ86T26 416 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 ZNF584Q8IVC4 421 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 MINDY1Q8N5J2 469 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 OR52N5Q8NH56 324 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 VANGL1Q8TAA9 524 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 SSMEM1Q8WWF3 244 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 ARHGAP45Q92619 1136 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 ZNF622Q969S3 477 aaKnown RBP eCLIP2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 DHX58Q96C10 678 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 SPDL1Q96EA4 605 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 RSRC1Q96IZ7 334 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 RAD9AQ99638 391 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 OR2B2Q9GZK3 357 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 MIS12Q9H081 205 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 SHARPINQ9H0F6 387 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 OPA3Q9H6K4 179 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 PDE7BQ9NP56 450 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 EQTNQ9NQ60 294 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 GKN1Q9NS71 199 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 GIMAP4Q9NUV9 329 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 DPP3Q9NY33 737 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 SPHK1Q9NYA1 384 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 ERAP1Q9NZ08 941 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 GRID1Q9ULK0 1009 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 TNNQ9UQP3 1299 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 PPP2R2CQ9Y2T4 447 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 NME7Q9Y5B8 376 aa2.78□□□□□ -1.96
SMCHD1-206ENST00000581631 ENO4A6NNW6 628 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 MAGEC1O60732 1142 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 DARSP14868 501 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 CDC25CP30307 473 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 ACTN2P35609 894 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 MMP12P39900 470 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 OPRL1P41146 370 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 PGFP49763 221 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 LIMK2P53671 638 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 MAZP56270 477 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 GSDMDP57764 484 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 GCNT1Q02742 428 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 STK4Q13043 487 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 HERC3Q15034 1050 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 SYT14P1Q58G82 188 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 FIP1L1Q6UN15 594 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 TMEM207Q6UWW9 146 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 Q6ZRP5 223 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 ARHGAP22Q7Z5H3 698 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 GPRC5AQ8NFJ5 357 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 SMAP2Q8WU79 429 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 PRPF31Q8WWY3 499 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 CENPTQ96BT3 561 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 PTERQ96BW5 349 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 NXNL1Q96CM4 212 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 TMCO6Q96DC7 493 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 SPACA9Q96E40 222 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 SFXN2Q96NB2 322 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 GPATCH1Q9BRR8 931 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 MXD3Q9BW11 206 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 PITPNM3Q9BZ71 974 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 WNT5BQ9H1J7 359 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 CPVLQ9H3G5 476 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms