RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CA4P22748 312 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 ACAT1P24752 427 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 PSMA3P25788 255 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 DCTP40126 519 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 B3GALT5-AS1P59052 145 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 WDR38Q5JTN6 314 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 MPP7Q5T2T1 576 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 CYP4A22Q5TCH4 519 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 SLC27A1Q6PCB7 646 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 C19orf48Q6RUI8 117 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 MOXD1Q6UVY6 613 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 SMIM29Q86T20 159 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 NUDT13Q86X67 352 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 EID3Q8N140 333 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 MAPKAPK5-AS1Q8N8E1 139 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 BMPERQ8N8U9 685 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 ZNF383Q8NA42 475 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 KCNE4Q8WWG9 221 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 FCAMRQ8WWV6 532 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 NSL1Q96IY1 281 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM20AQ96MK3 541 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 URM1Q9BTM9 101 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 PRRG4Q9BZD6 226 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 LAT2Q9GZY6 243 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 COQ3Q9NZJ6 369 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 TXNDC16Q9P2K2 825 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 NOL7Q9UMY1 257 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 SNX7Q9UNH6 387 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 WDR83OSQ9Y284 106 aa4.3□□□□□ -1.72
SMCHD1-205ENST00000581383 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 LOC101059948A0A1B0GTJ6 334 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 HTR3EA5X5Y0 456 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 CIDEAO60543 219 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 RPN1P04843 607 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 HSP90AB1P08238 724 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 PLA2G4BP0C869 781 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 IGHV4-38-2P0DP08 117 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 IRF2P14316 349 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 LINC01547P58512 204 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 ODF4Q2M2E3 257 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 STPG1Q5TH74 334 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM91A1Q658Y4 838 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 ENPP7Q6UWV6 458 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 MFSD6Q6ZSS7 791 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 SPATA19Q7Z5L4 167 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 RTN4RL2Q86UN3 420 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 LGI2Q8N0V4 545 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 SIX6OS1Q8N1H7 587 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 ZNF843Q8N446 348 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 STPG4Q8N801 248 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 OR4K1Q8NGD4 311 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 LRRC8CQ8TDW0 803 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 PIGBQ92521 554 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 NSMAFQ92636 917 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 PROX1Q92786 737 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 WBP2Q969T9 261 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM162AQ96A26 154 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 EXOC4Q96A65 974 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 TMEM143Q96AN5 459 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 SPATA33Q96N06 139 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 JAKMIP1Q96N16 626 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 INTS14Q96SY0 518 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 SDR39U1Q9NRG7 319 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 SPHK1Q9NYA1 384 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 DNAJB9Q9UBS3 223 aa4.29□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM172BPA6NC97 362 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 SLC22A2O15244 555 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 MOCS3O95396 460 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 GSRP00390 522 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 UMODP07911 640 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 ZFYP08048 801 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM58BPP0C7Q3 252 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 LIFP15018 202 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 PAX1P15863 534 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 EPCAMP16422 314 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 EFNA1P20827 205 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 GSDMDP57764 484 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 PHEXP78562 749 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 DLK1P80370 383 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 SCN1BQ07699 218 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 TAF10Q12962 218 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 TUBB2AQ13885 445 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 LACTB2Q53H82 288 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 C1QTNF12Q5T7M4 302 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 SFMBT2Q5VUG0 894 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 MMD2Q8IY49 270 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM9BQ8IZU0 186 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 KLHDC9Q8NEP7 349 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 OCC1Q8TAD7 63 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 HEXDCQ8WVB3 486 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 TM9SF4Q92544 642 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 FAM71F1Q96KD3 344 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 CCDC114Q96M63 670 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 FNBP1Q96RU3 617 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 TUBB2BQ9BVA1 445 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 MMP28Q9H239 520 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 Q9H8V8 135 aa4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 ZNF334Q9HCZ1 680 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-205ENST00000581383 TRIM17Q9Y577 477 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms