RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 LMNTD1Q8N9Z9 388 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 OR9A1PQ8NGU1 263 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 DENND1AQ8TEH3 1009 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 ZUFSPQ96AP4 578 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 CLIP3Q96DZ5 547 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 GPR21Q99679 349 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 SLC30A3Q99726 388 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 TRIM51Q9BSJ1 452 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 AARSD1Q9BTE6 412 aaKnown RBP14.29□□□□□ -0.12
SS18-212ENST00000579061 SLC7A5P2Q9GIP4 190 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 CHST8Q9H2A9 424 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 FAM114A2Q9NRY5 505 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 PCMTD2Q9NV79 361 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.29□□□□□ -0.12
SS18-212ENST00000579061 CIDEBQ9UHD4 219 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 SRPK3Q9UPE1 567 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 PLCL2Q9UPR0 1127 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 RUVBL2Q9Y230 463 aaKnown RBP14.29□□□□□ -0.12
SS18-212ENST00000579061 POLHQ9Y253 713 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 FARSAQ9Y285 508 aaKnown RBP14.29□□□□□ -0.12
SS18-212ENST00000579061 TEX264Q9Y6I9 313 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 ANKRD12Q6UB98 2062 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 FAM187AA6NFU0 413 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ZNF839A8K0R7 811 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ARHGEF33A8MVX0 844 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 EFCAB8A8MWE9 144 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 MYO1CO00159 1063 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ZNF749O43361 778 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 VPS26AO75436 327 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 OR2B3O76000 313 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 SPTA1P02549 2419 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 FAM87AP0C7U9 286 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ERVK-10P10266 1014 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 CASQ1P31415 396 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ELK3P41970 407 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 SKIV2L2P42285 1042 aaKnown RBP14.28□□□□□ -0.12
SS18-212ENST00000579061 ERV3-1Q14264 604 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 FRG1Q14331 258 aaKnown RBP14.28□□□□□ -0.12
SS18-212ENST00000579061 NAA25Q14CX7 972 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ZC3H12BQ5HYM0 836 aaKnown RBP14.28□□□□□ -0.12
SS18-212ENST00000579061 ZNF385CQ66K41 422 aaPredicted RBP14.28□□□□□ -0.12
SS18-212ENST00000579061 STEAP4Q687X5 459 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 LRRC8EQ6NSJ5 796 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 RHBDD2Q6NTF9 364 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 FAM199XQ6PEV8 388 aaPredicted RBP14.28□□□□□ -0.12
SS18-212ENST00000579061 IGDCC3Q8IVU1 814 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 SYTL1Q8IYJ3 562 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 C2orf73Q8N5S3 287 aaPredicted RBP14.28□□□□□ -0.12
SS18-212ENST00000579061 BBOF1Q8ND07 529 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 GIMAP7Q8NHV1 300 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 PROKR1Q8TCW9 393 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 CD200R1Q8TD46 325 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 APOBEC4Q8WW27 367 aaKnown RBP14.28□□□□□ -0.12
SS18-212ENST00000579061 CERS2Q96G23 380 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 KRT12Q99456 494 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 NLNQ9BYT8 704 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ACTL8Q9H568 366 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ENAMQ9NRM1 1142 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 EURLQ9NYK6 297 aa14.28□□□□□ -0.12
SS18-212ENST00000579061 ZC3H7BQ9UGR2 993 aaKnown RBP14.28□□□□□ -0.12
SS18-212ENST00000579061 BOD1L1Q8NFC6 3051 aa14.27□□□□□ -0.12
SS18-212ENST00000579061 A0A1W2PPV9 198 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 E7ESA3 106 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 GFYI3L273 518 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 TP73O15350 636 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 HCRTR1O43613 425 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 AGXTP21549 392 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 RPL21P46778 160 aaKnown RBP14.27□□□□□ -0.13
SS18-212ENST00000579061 POLE2P56282 527 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 COL9A2Q14055 689 aaPredicted RBP14.27□□□□□ -0.13
SS18-212ENST00000579061 UGT8Q16880 541 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 DEFB110Q30KQ9 67 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 DEFB109BQ30KR1 87 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.27□□□□□ -0.13
SS18-212ENST00000579061 TEDDM1Q5T9Z0 273 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 FAM198BQ6UWH4 519 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 CYHR1Q6ZMK1 362 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 MAATS1Q7Z4T9 603 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 TAX1BP1Q86VP1 789 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 FAM20CQ8IXL6 584 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 SPATA4Q8NEY3 305 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 OR2A1Q8NGT9 310 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 ASB11Q8WXH4 323 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 SMPDL3AQ92484 453 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 C17orf62Q9BQA9 187 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 DHRS4Q9BTZ2 278 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 SPRTNQ9H040 489 aaPredicted RBP14.27□□□□□ -0.13
SS18-212ENST00000579061 PLAC1Q9HBJ0 212 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 STARD5Q9NSY2 213 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 TAS2R13Q9NYV9 303 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 CORO1CQ9ULV4 474 aaPredicted RBP14.27□□□□□ -0.13
SS18-212ENST00000579061 CHMP2BQ9UQN3 213 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 CCDC88CQ9P219 2028 aa14.27□□□□□ -0.13
SS18-212ENST00000579061 MDC1Q14676 2089 aaKnown RBP14.26□□□□□ -0.13
SS18-212ENST00000579061 B8ZZF3 427 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 ZSCAN9O15535 394 aaPredicted RBP14.26□□□□□ -0.13
SS18-212ENST00000579061 ZBTB14O43829 449 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 AHSGP02765 367 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 CAPN1P07384 714 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 F7P08709 466 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms