RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 P2RY12Q9H244 342 aa14.35□□□□□ -0.11
RN7SL560P-201ENST00000577943 ZKSCAN5Q9Y2L8 839 aa14.35□□□□□ -0.11
RN7SL560P-201ENST00000577943 MRFAP1Q9Y605 127 aa14.35□□□□□ -0.11
RN7SL560P-201ENST00000577943 NFS1Q9Y697 457 aa14.35□□□□□ -0.11
RN7SL560P-201ENST00000577943 A0A1B0GX78 115 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 CEP104O60308 925 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 CNOT3O75175 753 aaKnown RBP14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 VAPBO95292 243 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 CCDC175P0C221 793 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 PIM1P11309 404 aaPredicted RBP14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 BDKRB1P46663 353 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 FOXL2P58012 376 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 INPP5JQ15735 1006 aaPredicted RBP14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 CYP2A13Q16696 494 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 DCAF10Q5QP82 559 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 VWA5B1Q5TIE3 1220 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 SLC6A19Q695T7 634 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 FCRL6Q6DN72 434 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 MRNIPQ6NTE8 343 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 CES3Q6UWW8 571 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 SDCCAG8Q86SQ7 713 aaPredicted RBP14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 PNPLA2Q96AD5 504 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 MFSD3Q96ES6 412 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 SYBUQ9NX95 663 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 P4HTMQ9NXG6 502 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 C5AR2Q9P296 337 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 HIVEP3Q5T1R4 2406 aa14.34□□□□□ -0.11
RN7SL560P-201ENST00000577943 BLACEA4D250 179 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 PFDN6O15212 129 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 KLHL41O60662 606 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 AGFG2O95081 481 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 FKBP9O95302 570 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 C1orf105O95561 183 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 ALPPP05187 535 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 UMODP07911 640 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 TPSB2P20231 275 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 MCM3P25205 808 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 VARSP26640 1264 aaKnown RBP14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 FMO4P31512 558 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 TERF1P54274 439 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 CDK16Q00536 496 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 GRM7Q14831 915 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 MYBPC3Q14896 1274 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 TPSAB1Q15661 275 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 TCTE1Q5JU00 501 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 CTSL3PQ5NE16 218 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 FHL5Q5TD97 284 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 LRRC8BQ6P9F7 803 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 CNSTQ6PJW8 725 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 ZNF662Q6ZS27 426 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 GALNT16Q8N428 558 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 TTC29Q8NA56 475 aaPredicted RBP14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 TRIM58Q8NG06 486 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 MAGEC3Q8TD91 643 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 ZUFSPQ96AP4 578 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 MIPEPQ99797 713 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 SELENOSQ9BQE4 189 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 KIFC1Q9BW19 673 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 MRM3Q9HC36 420 aaKnown RBP14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 LRRC4CQ9HCJ2 640 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 HOMER3Q9NSC5 361 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 CUTCQ9NTM9 273 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 TSR3Q9UJK0 312 aaKnown RBP14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 RUVBL2Q9Y230 463 aaKnown RBP14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 SVILO95425 2214 aa14.33□□□□□ -0.12
RN7SL560P-201ENST00000577943 PRRC2CQ9Y520 2896 aaKnown RBP14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 ZGRF1Q86YA3 2104 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 TCRBV7S3A2A0A539 114 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 TARM1B6A8C7 271 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 GOLGA8KD6RF30 607 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 GOLGA8TH3BQL2 631 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 MASP2O00187 686 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 DSCR3O14972 297 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 GP1BBP13224 206 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 ARNTP27540 789 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 PSMB5P28074 263 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 CXCR5P32302 372 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 CCNFP41002 786 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 GCGRP47871 477 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 SARNPP82979 210 aaKnown RBP14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 TRIP13Q15645 432 aaPredicted RBP14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 KCTD19Q17RG1 926 aaPredicted RBP14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 CCSMST1Q4G0I0 132 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 PRR30Q53SZ7 412 aaPredicted RBP14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 RNF187Q5TA31 235 aaPredicted RBP14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 PPP1R32Q7Z5V6 425 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 Q8NA96 180 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 FKBP10Q96AY3 582 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 SLC29A3Q9BZD2 475 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 ZNF552Q9H707 407 aaPredicted RBP14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 ATP13A2Q9NQ11 1180 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 SLC22A11Q9NSA0 550 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 SOX13Q9UN79 622 aa14.32□□□□□ -0.12
RN7SL560P-201ENST00000577943 KRT87PA6NCN2 255 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 H3BMM5 538 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 AGPSO00116 658 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 PRICKLE3O43900 615 aaPredicted RBP14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 NIPSNAP2O75323 286 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 IPO13O94829 963 aaKnown RBP14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 ALBP02768 609 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms