RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ING2Q9H160 280 aa11.43□□□□□ -0.58
LITAF-219ENST00000576334 SYTL2Q9HCH5 934 aa11.43□□□□□ -0.58
LITAF-219ENST00000576334 EURLQ9NYK6 297 aa11.43□□□□□ -0.58
LITAF-219ENST00000576334 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.43□□□□□ -0.58
LITAF-219ENST00000576334 SLC39A10Q9ULF5 831 aa11.43□□□□□ -0.58
LITAF-219ENST00000576334 PRRC2CQ9Y520 2896 aaKnown RBP11.43□□□□□ -0.58
LITAF-219ENST00000576334 FAM237BA0A1B0GVD1 139 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 A0A1W2PPV9 198 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 SDR42E2A6NKP2 422 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 CYSRT1A8MQ03 144 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 ARHGEF33A8MVX0 844 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 F8W8V4 182 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 NRDCO43847 1150 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 PHF2O75151 1096 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 PKMP14618 531 aaKnown RBP11.42□□□□□ -0.58
LITAF-219ENST00000576334 ALAS2P22557 587 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 OTX2P32243 289 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 CASRP41180 1078 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 SLC1A2P43004 574 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 MAGEA3P43357 314 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 GCGRP47871 477 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 CSRP3P50461 194 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 PGGT1BP53609 377 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 MPP1Q00013 466 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 ATP1A4Q13733 1029 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 KLHL38Q2WGJ6 581 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 MSS51Q4VC12 460 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 RHBDD2Q6NTF9 364 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 TCTN3Q6NUS6 607 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 SUSD1Q6UWL2 747 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 SDCCAG8Q86SQ7 713 aaPredicted RBP11.42□□□□□ -0.58
LITAF-219ENST00000576334 LRRC6Q86X45 466 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 MCATQ8IVS2 390 aaKnown RBP11.42□□□□□ -0.58
LITAF-219ENST00000576334 MCUQ8NE86 351 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 OR2A1Q8NGT9 310 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 GSDMBQ8TAX9 411 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 ACTRT1Q8TDG2 376 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 MESP1Q9BRJ9 268 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 RRAGDQ9NQL2 400 aaPredicted RBP11.42□□□□□ -0.58
LITAF-219ENST00000576334 LUZP4Q9P127 313 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 SAMD15Q9P1V8 674 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 SLC17A6Q9P2U8 582 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 SNX12Q9UMY4 172 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 PLCL2Q9UPR0 1127 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 MAD1L1Q9Y6D9 718 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 PCM1Q15154 2024 aa11.42□□□□□ -0.58
LITAF-219ENST00000576334 LOC105369274A0A096LPK9 316 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 LOC102723532A0A0G2JNH3 316 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 AP3B1O00203 1094 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 ALOX12BO75342 701 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 HAUS5O94927 633 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 MATN4O95460 622 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 RECKO95980 971 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 ESR1P03372 595 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 RPN2P04844 631 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 OGNP20774 298 aaKnown RBP11.41□□□□□ -0.58
LITAF-219ENST00000576334 AGXTP21549 392 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 CLCN7P51798 805 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 SARNPP82979 210 aaKnown RBP11.41□□□□□ -0.58
LITAF-219ENST00000576334 TSTA3Q13630 321 aaPredicted RBP11.41□□□□□ -0.58
LITAF-219ENST00000576334 NADK2Q4G0N4 442 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 HP1BP3Q5SSJ5 553 aaPredicted RBP11.41□□□□□ -0.58
LITAF-219ENST00000576334 FRMPD2BQ6IN97 320 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 SHISA6Q6ZSJ9 500 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 TTLL10Q6ZVT0 673 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 IGDCC3Q8IVU1 814 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 OR4N4Q8N0Y3 316 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 PPFIBP2Q8ND30 876 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 FDCSPQ8NFU4 85 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 THAP4Q8WY91 577 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 RAD51AP1Q96B01 352 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 CAPZA3Q96KX2 299 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 NUDT9Q9BW91 350 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 SLC6A20Q9NP91 592 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 ACSS2Q9NR19 701 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 C20orf96Q9NUD7 363 aaPredicted RBP11.41□□□□□ -0.58
LITAF-219ENST00000576334 ABCF3Q9NUQ8 709 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 IFT80Q9P2H3 777 aaPredicted RBP11.41□□□□□ -0.58
LITAF-219ENST00000576334 NDOR1Q9UHB4 597 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 ANAPC2Q9UJX6 822 aa11.41□□□□□ -0.58
LITAF-219ENST00000576334 PTRH2Q9Y3E5 179 aaKnown RBP11.41□□□□□ -0.58
LITAF-219ENST00000576334 ANKRD12Q6UB98 2062 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 UTP20O75691 2785 aaKnown RBP11.4□□□□□ -0.58
LITAF-219ENST00000576334 A0A0J9YVX5 310 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 CTAGE9A4FU28 777 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 C9J4A7 227 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 KPNA5O15131 536 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 KDM1AO60341 852 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 USP1O94782 785 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 UMODP07911 640 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 MLNP12872 115 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 VSX2P58304 361 aaPredicted RBP11.4□□□□□ -0.58
LITAF-219ENST00000576334 SNRPNP63162 240 aaKnown RBP11.4□□□□□ -0.58
LITAF-219ENST00000576334 DCDP81605 110 aaKnown RBP11.4□□□□□ -0.58
LITAF-219ENST00000576334 TIAL1Q01085 375 aaKnown RBP eCLIP11.4□□□□□ -0.58
LITAF-219ENST00000576334 DHX9Q08211 1270 aaKnown RBP11.4□□□□□ -0.58
LITAF-219ENST00000576334 KLRB1Q12918 225 aa11.4□□□□□ -0.58
LITAF-219ENST00000576334 THOC5Q13769 683 aaKnown RBP11.4□□□□□ -0.58
LITAF-219ENST00000576334 NKAIN1Q4KMZ8 207 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms