RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ULBP3Q9BZM4 244 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 SLC22A11Q9NSA0 550 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 PCMTD2Q9NV79 361 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 AKAP7Q9P0M2 348 aaPredicted RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 SPATA7Q9P0W8 599 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 DMGDHQ9UI17 866 aaKnown RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 TSR3Q9UJK0 312 aaKnown RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 ANAPC5Q9UJX4 755 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 KLHL20Q9Y2M5 609 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 TDRKHQ9Y2W6 561 aaKnown RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 PCDHGA6Q9Y5G7 932 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 TCRBV9S1A1TA0A576 114 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 OR2A25A4D2G3 310 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 FAM159BA6NKW6 160 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 E7ENX8 843 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 KPNA5O15131 536 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 SLC16A8O95907 504 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 MPC1LP0DKB6 136 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 ZNF37AP17032 561 aaPredicted RBP8.35□□□□□ -1.07
SMG6-216ENST00000575176 CDH3P22223 829 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 SSTR1P30872 391 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 CARSP49589 748 aaKnown RBP8.35□□□□□ -1.07
SMG6-216ENST00000575176 NFKB2Q00653 900 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 ACY1Q03154 408 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 TAP2Q03519 686 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 FOXM1Q08050 763 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 IL10RAQ13651 578 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 THOC5Q13769 683 aaKnown RBP8.35□□□□□ -1.07
SMG6-216ENST00000575176 COL9A2Q14055 689 aaPredicted RBP8.35□□□□□ -1.07
SMG6-216ENST00000575176 ZNF460Q14592 562 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 ATP1A1-AS1Q5TC04 95 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 ZNF425Q6IV72 752 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 PAQR3Q6TCH7 311 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 MBOAT1Q6ZNC8 495 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 RNF44Q7L0R7 432 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 GPR155Q7Z3F1 870 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 SDCCAG8Q86SQ7 713 aaPredicted RBP8.35□□□□□ -1.07
SMG6-216ENST00000575176 PPP1R3BQ86XI6 285 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 CEP97Q8IW35 865 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 ZBED8Q8IZ13 594 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 DSELQ8IZU8 1212 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 DTWD1Q8N5C7 304 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 C2orf73Q8N5S3 287 aaPredicted RBP8.35□□□□□ -1.07
SMG6-216ENST00000575176 EXD3Q8N9H8 876 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 OR2L3Q8NG85 312 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 CFAP61Q8NHU2 1237 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 GSDMBQ8TAX9 411 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 CALML6Q8TD86 181 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 ADAMTS17Q8TE56 1095 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 CT55Q8WUE5 264 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 ELMO2Q96JJ3 720 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 PKP4Q99569 1192 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 LRRC1Q9BTT6 524 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 TSSK1BQ9BXA7 367 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 LHX9Q9NQ69 397 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 CROTQ9UKG9 612 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 VPS9D1Q9Y2B5 631 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 COMMD10Q9Y6G5 202 aa8.35□□□□□ -1.07
SMG6-216ENST00000575176 HMX2A2RU54 273 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 TMEM150CB9EJG8 249 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 ERVH48-1M5A8F1 160 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 EIF3HO15372 352 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMG6-216ENST00000575176 SCRG1O75711 98 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 NTRK1P04629 796 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 CBSLP0DN79 551 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 ENO3P13929 434 aaPredicted RBP8.34□□□□□ -1.07
SMG6-216ENST00000575176 CHRM3P20309 590 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 MCM3P25205 808 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 MAP4P27816 1152 aaKnown RBP8.34□□□□□ -1.07
SMG6-216ENST00000575176 CBSP35520 551 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 GMPRP36959 345 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 CCNFP41002 786 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 GRIA3P42263 894 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 TAS2R39P59534 338 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 SLC7A5Q01650 507 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 EFTUD2Q15029 972 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMG6-216ENST00000575176 ZKSCAN8Q15776 578 aaPredicted RBP8.34□□□□□ -1.07
SMG6-216ENST00000575176 WHAMMP3Q1A5X7 153 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 CRTC2Q53ET0 693 aaPredicted RBP8.34□□□□□ -1.07
SMG6-216ENST00000575176 TMEM164Q5U3C3 297 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 HECTD2Q5U5R9 776 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 FAM69BQ5VUD6 431 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 FRMPD2BQ6IN97 320 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 ZNF449Q6P9G9 518 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 FAM199XQ6PEV8 388 aaPredicted RBP8.34□□□□□ -1.07
SMG6-216ENST00000575176 CCDC81Q6ZN84 652 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 CYS1Q717R9 158 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 COX15Q7KZN9 410 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 SLC26A11Q86WA9 606 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 PAQR7Q86WK9 346 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 SHISA5Q8N114 240 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 MMGT1Q8N4V1 131 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 PPFIBP2Q8ND30 876 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 OR9A1PQ8NGU1 263 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 OR8K5Q8NH50 307 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 EEF1AKMT1Q8WVE0 214 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 ANKRD49Q8WVL7 239 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 INPP5DQ92835 1189 aa8.34□□□□□ -1.07
SMG6-216ENST00000575176 RAD51AP1Q96B01 352 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms