RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 NFS1Q9Y697 457 aa20.3■□□□□ 0.84
CHRNB1-206ENST00000574054 BLACEA4D250 179 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 AP3B1O00203 1094 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 IGHEP01854 428 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 CYP2A13Q16696 494 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 ZC3H12BQ5HYM0 836 aaKnown RBP20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 FCRL6Q6DN72 434 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 RAB42Q8N4Z0 105 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 PNPLA2Q96AD5 504 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 PTERQ96BW5 349 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 SYBUQ9NX95 663 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 CCDC88CQ9P219 2028 aa20.29■□□□□ 0.84
CHRNB1-206ENST00000574054 A0A1B0GX78 115 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 KRT87PA6NCN2 255 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 GOLGA8KD6RF30 607 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 GOLGA8TH3BQL2 631 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 MASP2O00187 686 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 KPNA5O15131 536 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 CEP104O60308 925 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 AGFG2O95081 481 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 VAPBO95292 243 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 C1orf105O95561 183 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 ALPPP05187 535 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 UMODP07911 640 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 CCDC175P0C221 793 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 GP1BBP13224 206 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 RPS3P23396 243 aaKnown RBP eCLIP20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 MCM3P25205 808 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 FMO4P31512 558 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 ARSFP54793 590 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 CCSMST1Q4G0I0 132 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 MRNIPQ6NTE8 343 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 MRPL14Q6P1L8 145 aaKnown RBP20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 CNSTQ6PJW8 725 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 PPP1R32Q7Z5V6 425 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 SDCCAG8Q86SQ7 713 aaPredicted RBP20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 TMEM151BQ8IW70 566 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 GALNT16Q8N428 558 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 Q8NA96 180 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 RAD51AP1Q96B01 352 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 MFSD3Q96ES6 412 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 FOPNLQ96NB1 174 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 MIPEPQ99797 713 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 SELENOSQ9BQE4 189 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 SLC22A11Q9NSA0 550 aa20.28■□□□□ 0.84
CHRNB1-206ENST00000574054 PSMB5P28074 263 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 MYBPC3Q14896 1274 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 TRIP13Q15645 432 aaPredicted RBP20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 CTSL3PQ5NE16 218 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 FHL5Q5TD97 284 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 TTC29Q8NA56 475 aaPredicted RBP20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 DENND1AQ8TEH3 1009 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 FAM136AQ96C01 138 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 KIFC1Q9BW19 673 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 LRRC4CQ9HCJ2 640 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 CUTCQ9NTM9 273 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 C5AR2Q9P296 337 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 CDC23Q9UJX2 597 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 MRFAP1Q9Y605 127 aa20.27■□□□□ 0.84
CHRNB1-206ENST00000574054 DSCR3O14972 297 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 PIM1P11309 404 aaPredicted RBP20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 ITGAXP20702 1163 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 ARNTP27540 789 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 CXCR5P32302 372 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 CCNFP41002 786 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 GCGRP47871 477 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 VPS41P49754 854 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 CDK16Q00536 496 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 GRM7Q14831 915 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 TCTE1Q5JU00 501 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 LRRC8BQ6P9F7 803 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 METTL27Q8N6F8 245 aaPredicted RBP20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 FKBP10Q96AY3 582 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 SLC29A3Q9BZD2 475 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 MRM3Q9HC36 420 aaKnown RBP20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 FBXL4Q9UKA2 621 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 SHANK1Q9Y566 2161 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 ESPL1Q14674 2120 aa20.26■□□□□ 0.83
CHRNB1-206ENST00000574054 TCRBV7S3A2A0A539 114 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 PFDN6O15212 129 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 CTSVO60911 334 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 NIPSNAP2O75323 286 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 FKBP9O95302 570 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 TPSB2P20231 275 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 VSX2P58304 361 aaPredicted RBP20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 TPSAB1Q15661 275 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 RNF187Q5TA31 235 aaPredicted RBP20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 YOD1Q5VVQ6 348 aaPredicted RBP20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 CASC4Q6P4E1 433 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 OVCH1Q7RTY7 1134 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 TRIM58Q8NG06 486 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 LPGAT1Q92604 370 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 ZUFSPQ96AP4 578 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 BIRC8Q96P09 236 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 PSMG3-AS1Q96PY0 264 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 ATP13A2Q9NQ11 1180 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 HOMER3Q9NSC5 361 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 SOX13Q9UN79 622 aa20.25■□□□□ 0.83
CHRNB1-206ENST00000574054 FAM169AQ9Y6X4 670 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms