RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 KCNJ11Q14654 390 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 TYSND1Q2T9J0 566 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 CCSMST1Q4G0I0 132 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 RNF187Q5TA31 235 aaPredicted RBP16.64■□□□□ 0.25
LITAF-211ENST00000572255 FCRL6Q6DN72 434 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 MRPL14Q6P1L8 145 aaKnown RBP16.64■□□□□ 0.25
LITAF-211ENST00000572255 CNSTQ6PJW8 725 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 FIGLAQ6QHK4 219 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 EFCAB3Q8N7B9 438 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 LPGAT1Q92604 370 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 BIRC8Q96P09 236 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 TCF12Q99081 682 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 PPP2R2CQ9Y2T4 447 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 MRFAP1Q9Y605 127 aa16.64■□□□□ 0.25
LITAF-211ENST00000572255 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.63■□□□□ 0.25
LITAF-211ENST00000572255 KRT87PA6NCN2 255 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 DPM1O60762 260 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 NIPSNAP2O75323 286 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 AVILO75366 819 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 SORBS2O94875 1100 aaKnown RBP16.63■□□□□ 0.25
LITAF-211ENST00000572255 FKBP9O95302 570 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 ALAS2P22557 587 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 CCNFP41002 786 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 GRIA3P42263 894 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 MAGEA6P43360 314 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 ARSFP54793 590 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 FOXL2P58012 376 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 SARNPP82979 210 aaKnown RBP16.63■□□□□ 0.25
LITAF-211ENST00000572255 RAPSNQ13702 412 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 ZC3H12BQ5HYM0 836 aaKnown RBP16.63■□□□□ 0.25
LITAF-211ENST00000572255 KIAA0930Q6ICG6 404 aaPredicted RBP16.63■□□□□ 0.25
LITAF-211ENST00000572255 TTLL10Q6ZVT0 673 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 HPS6Q86YV9 775 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 RAB42Q8N4Z0 105 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 CPT1CQ8TCG5 803 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 DENND1AQ8TEH3 1009 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 PTERQ96BW5 349 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 FOPNLQ96NB1 174 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 SLC22A11Q9NSA0 550 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 ANKMY1Q9P2S6 941 aa16.63■□□□□ 0.25
LITAF-211ENST00000572255 TSR3Q9UJK0 312 aaKnown RBP16.63■□□□□ 0.25
LITAF-211ENST00000572255 A0A1B0GX78 115 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 H3BMM5 538 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 PEX12O00623 359 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 PFDN6O15212 129 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 IGHEP01854 428 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 ESR1P03372 595 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 UMODP07911 640 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 ITGAXP20702 1163 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 PSMB5P28074 263 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 ATP5DP30049 168 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 SRSF1Q07955 248 aaKnown RBP eCLIP16.62■□□□□ 0.25
LITAF-211ENST00000572255 GBX1Q14549 363 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 TCTE1Q5JU00 501 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 DCAF10Q5QP82 559 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 ANKRD22Q5VYY1 191 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 JMJD6Q6NYC1 403 aaPredicted RBP16.62■□□□□ 0.25
LITAF-211ENST00000572255 TTC27Q6P3X3 843 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 CASC4Q6P4E1 433 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 PPP1R32Q7Z5V6 425 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 CAND1Q86VP6 1230 aaKnown RBP16.62■□□□□ 0.25
LITAF-211ENST00000572255 TMEM151BQ8IW70 566 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 HMGCLL1Q8TB92 370 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 FAM136AQ96C01 138 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 FER1L6-AS2Q96M78 137 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 SMAD5Q99717 465 aaKnown RBP16.62■□□□□ 0.25
LITAF-211ENST00000572255 MFRPQ9BY79 579 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 P4HTMQ9NXG6 502 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 CRYL1Q9Y2S2 319 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 NUP210LQ5VU65 1888 aa16.62■□□□□ 0.25
LITAF-211ENST00000572255 SHANK1Q9Y566 2161 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 TARM1B6A8C7 271 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 DSCR3O14972 297 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 NRDCO43847 1150 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 CTSVO60911 334 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 VPS4BO75351 444 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 KRT14P02533 472 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 PAMP19021 973 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 OGNP20774 298 aaKnown RBP16.61■□□□□ 0.25
LITAF-211ENST00000572255 MCM3P25205 808 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 ADARP55265 1226 aaKnown RBP16.61■□□□□ 0.25
LITAF-211ENST00000572255 GRM7Q14831 915 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 VWA5B1Q5TIE3 1220 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 YOD1Q5VVQ6 348 aaPredicted RBP16.61■□□□□ 0.25
LITAF-211ENST00000572255 ARMC3Q5W041 872 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 FAM26EQ8N5C1 309 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 RBMXL3Q8N7X1 1067 aaKnown RBP16.61■□□□□ 0.25
LITAF-211ENST00000572255 CLEC1AQ8NC01 280 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 GALNT11Q8NCW6 608 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 MAGEC3Q8TD91 643 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 ZUFSPQ96AP4 578 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 FKBP10Q96AY3 582 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 ZNF285Q96NJ3 590 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 MIPEPQ99797 713 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 SELENOSQ9BQE4 189 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 TRIM56Q9BRZ2 755 aaKnown RBP16.61■□□□□ 0.25
LITAF-211ENST00000572255 CUTCQ9NTM9 273 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 SPATA7Q9P0W8 599 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 LUZP4Q9P127 313 aa16.61■□□□□ 0.25
LITAF-211ENST00000572255 SAMD15Q9P1V8 674 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms