RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 PLEKHS1Q5SXH7 462 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 FAM45BPQ6NSW5 357 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 UGT3A1Q6NUS8 523 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 TMEM71Q6P5X7 295 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 TRMT10CQ7L0Y3 403 aaKnown RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 MAMDC2Q7Z304 686 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 C17orf82Q86X59 251 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-205ENST00000571028 CPNE9Q8IYJ1 553 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 ESX1Q8N693 406 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 OR5AR1Q8NGP9 310 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 OR10G6Q8NH81 332 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 GIMAP7Q8NHV1 300 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 FAM45AQ8TCE6 357 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 KCNJ9Q92806 393 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 INPP5DQ92835 1189 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 SH3KBP1Q96B97 665 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 CYTH2Q99418 400 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 OLFM1Q99784 485 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 CPNE1Q99829 537 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 RHOJQ9H4E5 214 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 CAB39LQ9H9S4 337 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 POT1Q9NUX5 634 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 SLC39A10Q9ULF5 831 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 CDYLQ9Y232 598 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 POLHQ9Y253 713 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 MED16Q9Y2X0 877 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 VWA7Q9Y334 891 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 NFS1Q9Y697 457 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 COMMD10Q9Y6G5 202 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 COLEC10Q9Y6Z7 277 aa12.91□□□□□ -0.34
CCDC40-205ENST00000571028 A8MU76 341 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 RIPK2O43353 540 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 SEMA7AO75326 666 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 AMD1P17707 334 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 TNFRSF8P28908 595 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 BDKRB1P46663 353 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 FASLGP48023 281 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 PLOD1Q02809 727 aaPredicted RBP12.9□□□□□ -0.34
CCDC40-205ENST00000571028 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 ZNF460Q14592 562 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 USP10Q14694 798 aaKnown RBP12.9□□□□□ -0.34
CCDC40-205ENST00000571028 KLHL38Q2WGJ6 581 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 GRTP1Q5TC63 336 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 PAQR3Q6TCH7 311 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 TMEM26Q6ZUK4 368 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 CYS1Q717R9 158 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 GALNT7Q86SF2 657 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 SLC22A15Q8IZD6 547 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 EIF1ADQ8N9N8 165 aaKnown RBP12.9□□□□□ -0.34
CCDC40-205ENST00000571028 AVL9Q8NBF6 648 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 CD200R1Q8TD46 325 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 RBBP8Q99708 897 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.9□□□□□ -0.34
CCDC40-205ENST00000571028 XKR8Q9H6D3 395 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 ACSS3Q9H6R3 686 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 SLC40A1Q9NP59 571 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 LATS2Q9NRM7 1088 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 TMEM9Q9P0T7 183 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 PLAGL1Q9UM63 463 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 DHRS7Q9Y394 339 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 HEBP2Q9Y5Z4 205 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 IKBKGQ9Y6K9 419 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 UNC13CQ8NB66 2214 aa12.9□□□□□ -0.34
CCDC40-205ENST00000571028 ICE1Q9Y2F5 2266 aa12.9□□□□□ -0.35
CCDC40-205ENST00000571028 K7EM74 188 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 POLR1CO15160 346 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 SLCO2B1O94956 709 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 C1QAP02745 245 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 ELAVL4P26378 380 aaKnown RBP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 ACADLP28330 430 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 SPRP35270 261 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 DCTP40126 519 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 STAT5AP42229 794 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 MSH2P43246 934 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 TAS2R39P59534 338 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 TIAL1Q01085 375 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 MC2RQ01718 297 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 ERV3-1Q14264 604 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 SLC29A2Q14542 456 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 TIPARPQ7Z3E1 657 aaKnown RBP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 PIWIL4Q7Z3Z4 852 aaKnown RBP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 BMPERQ8N8U9 685 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 OR4E2Q8NGC2 313 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 EEF1AKMT1Q8WVE0 214 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 NCSTNQ92542 709 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 LINGO1Q96FE5 620 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 FOPNLQ96NB1 174 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 NRTNQ99748 197 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 MAP10Q9P2G4 905 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 KLHL3Q9UH77 587 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 SLC24A2Q9UI40 661 aa12.89□□□□□ -0.35
CCDC40-205ENST00000571028 CORO1CQ9ULV4 474 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 TMEM184BQ9Y519 407 aaPredicted RBP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 MRPS18BQ9Y676 258 aaKnown RBP12.89□□□□□ -0.35
CCDC40-205ENST00000571028 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms