RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 KIAA0930Q6ICG6 404 aaPredicted RBP11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 TLDC1Q6P9B6 456 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 RAB43Q86YS6 212 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 FAM20CQ8IXL6 584 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 RASGEF1CQ8N431 466 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 C2orf73Q8N5S3 287 aaPredicted RBP11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 ZNF655Q8N720 491 aaPredicted RBP11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 OR2L8Q8NGY9 312 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 ADAMTS17Q8TE56 1095 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 LPGAT1Q92604 370 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 RAD51AP1Q96B01 352 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 TCF12Q99081 682 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 NDC1Q9BTX1 674 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 MENTQ9BUN1 341 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 SLC25A23Q9BV35 468 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 SPRTNQ9H040 489 aaPredicted RBP11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 PLCL2Q9UPR0 1127 aa11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 RUVBL2Q9Y230 463 aaKnown RBP11.9□□□□□ -0.5
CTDNEP1-205ENST00000570828 HECTD1Q9ULT8 2610 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 H3BMH7 237 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 K7EM74 188 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 PGRMC1O00264 195 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 AVILO75366 819 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 TMEM63AO94886 807 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 ESR1P03372 595 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 CBSLP0DN79 551 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 CD46P15529 392 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 FMO4P31512 558 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 CBSP35520 551 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 BDKRB1P46663 353 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 CCL11P51671 97 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 RRADP55042 308 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 DCDP81605 110 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 GRB7Q14451 532 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 SF1Q15637 639 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 COLEC12Q5KU26 742 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 MLIPQ5VWP3 458 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 ANKRD22Q5VYY1 191 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZNF385CQ66K41 422 aaPredicted RBP11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 TTC27Q6P3X3 843 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 CNSTQ6PJW8 725 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 DNAJC22Q8N4W6 341 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 MAGEC3Q8TD91 643 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 DLG3Q92796 817 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 FAM136AQ96C01 138 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 MS4A14Q96JA4 679 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 GBP5Q96PP8 586 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 PRDM9Q9NQV7 894 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 EURLQ9NYK6 297 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 IFT80Q9P2H3 777 aaPredicted RBP11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 DHCR7Q9UBM7 475 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 NDOR1Q9UHB4 597 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 KLHL20Q9Y2M5 609 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 PCDHGA9Q9Y5G4 932 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
CTDNEP1-205ENST00000570828 GOLGA6L10A0A0M3HER8 536 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 E5RI56 91 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 GOLGA8MH3BSY2 632 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 NIPSNAP2O75323 286 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 FKBP9O95302 570 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 C1orf105O95561 183 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 PDGFAP04085 211 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 CD63P08962 238 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 MLNP12872 115 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 CHRM3P20309 590 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 ATP5DP30049 168 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 OTX2P32243 289 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 COILP38432 576 aaPredicted RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 FOLR3P41439 243 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 ADARP55265 1226 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 ATP1A4Q13733 1029 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 DHX34Q14147 1143 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 SLC9A5Q14940 896 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZC3H12BQ5HYM0 836 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZNF470Q6ECI4 717 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 NEPROQ6NW34 567 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 CCDC137Q6PK04 289 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 MED25Q71SY5 747 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 MRGPREQ86SM8 312 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 CILP2Q8IUL8 1156 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 MCATQ8IVS2 390 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZBTB2Q8N680 514 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 TMEM102Q8N9M5 508 aaPredicted RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 LMNTD1Q8N9Z9 388 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 DENND1AQ8TEH3 1009 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 ZNF669Q96BR6 464 aaPredicted RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 BIRC8Q96P09 236 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 CRYL1Q9Y2S2 319 aa11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 PTRH2Q9Y3E5 179 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-205ENST00000570828 PIKFYVEQ9Y2I7 2098 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 FLNCQ14315 2725 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 FAM237BA0A1B0GVD1 139 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 A0A1B0GX78 115 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 MAGEB16A2A368 324 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 KRT87PA6NCN2 255 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 SDR42E2A6NKP2 422 aa11.87□□□□□ -0.51
CTDNEP1-205ENST00000570828 PHF2O75151 1096 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms