RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 MAPK11Q15759 364 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 ZKSCAN8Q15776 578 aaPredicted RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 UGP2Q16851 508 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 CXorf66Q5JRM2 361 aaPredicted RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 SPOUT1Q5T280 376 aaKnown RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 RIPPLY2Q5TAB7 128 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 TMEM198Q66K66 360 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 CASC4Q6P4E1 433 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 PSRC1Q6PGN9 363 aaPredicted RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 ZBTB49Q6ZSB9 765 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 PRSS45Q7RTY3 260 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 ABI3BPQ7Z7G0 1075 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 ARID3BQ8IVW6 561 aaPredicted RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 SERPINA12Q8IW75 414 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 CDH26Q8IXH8 852 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 BATF2Q8N1L9 274 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 CCNYQ8ND76 341 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 OR52E1Q8NGJ3 308 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 BCL2L2Q92843 193 aaPredicted RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 NXNL1Q96CM4 212 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 SAMD8Q96LT4 415 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 TMEM68Q96MH6 324 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 ZNF560Q96MR9 790 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 SEMA3CQ99985 751 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 CADM1Q9BY67 442 aaKnown RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 RTN4RQ9BZR6 473 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 NPFFR1Q9GZQ6 430 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 ANKZF1Q9H8Y5 726 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 PRMT8Q9NR22 394 aaPredicted RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 RBM28Q9NW13 759 aaKnown RBP4.55□□□□□ -1.68
CHD9-220ENST00000569794 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.55□□□□□ -1.68
CHD9-220ENST00000569794 MAU2Q9Y6X3 613 aa4.55□□□□□ -1.68
CHD9-220ENST00000569794 NPHP3Q7Z494 1330 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 A0A1W2PR77 199 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 OR6C68A6NDL8 312 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 ARHGAP42A6NI28 874 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SLC30A4O14863 429 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 TIMM23O14925 209 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 TTI1O43156 1089 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SEC14L5O43304 696 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 CYTIPO60759 359 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 IL1AP01583 271 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 VPREB1P12018 145 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 ZNF182P17025 639 aaPredicted RBP4.54□□□□□ -1.68
CHD9-220ENST00000569794 AZGP1P25311 298 aaKnown RBP4.54□□□□□ -1.68
CHD9-220ENST00000569794 CD27P26842 260 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SERPINB6P35237 376 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 NAGLUP54802 743 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 GABPB1Q06547 395 aaPredicted RBP4.54□□□□□ -1.68
CHD9-220ENST00000569794 KRT33BQ14525 404 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 MXD4Q14582 209 aaPredicted RBP4.54□□□□□ -1.68
CHD9-220ENST00000569794 CEBPEQ15744 281 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 KCTD21Q4G0X4 260 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 FASTKD1Q53R41 847 aaKnown RBP4.54□□□□□ -1.68
CHD9-220ENST00000569794 CAVIN4Q5BKX8 364 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 TMEM268Q5VZI3 342 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 TBC1D9BQ66K14 1250 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 DHRS7BQ6IAN0 325 aaPredicted RBP4.54□□□□□ -1.68
CHD9-220ENST00000569794 SEPT14Q6ZU15 432 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 IQCF2Q8IXL9 164 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 CFAP206Q8IYR0 622 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 AFAP1Q8N556 730 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SCAIQ8N9R8 606 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 NCOA7Q8NI08 942 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 EXT2Q93063 718 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 ST6GALNAC6Q969X2 333 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SPSB1Q96BD6 273 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 ALG14Q96F25 216 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 NSMCE2Q96MF7 247 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 TRMT61BQ9BVS5 477 aaKnown RBP4.54□□□□□ -1.68
CHD9-220ENST00000569794 P2RY12Q9H244 342 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 MINDY3Q9H8M7 445 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 EBF2Q9HAK2 575 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SLC28A3Q9HAS3 691 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 EPB41L5Q9HCM4 733 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.54□□□□□ -1.68
CHD9-220ENST00000569794 FAM118AQ9NWS6 357 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 TMEM161AQ9NX61 479 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 P4HTMQ9NXG6 502 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SPG21Q9NZD8 308 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 C6orf203Q9P0P8 240 aaPredicted RBP4.54□□□□□ -1.68
CHD9-220ENST00000569794 HACL1Q9UJ83 578 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 MTUS1Q9ULD2 1270 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 SNX7Q9UNH6 387 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 ITM2BQ9Y287 266 aa4.54□□□□□ -1.68
CHD9-220ENST00000569794 UTYO14607 1347 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 ELOVL7A1L3X0 281 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 C5orf51A6NDU8 294 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 CFAP73A6NFT4 308 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 E2F3O00716 465 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 ANGPT2O15123 496 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 MTX2O75431 263 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 MED24O75448 989 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 SCGB2A1O75556 95 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 PMS2P2O95744 297 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 SLC16A8O95907 504 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 SERPINC1P01008 464 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 GH1P01241 217 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 IGHV4-30-4P0DP06 118 aa4.53□□□□□ -1.68
CHD9-220ENST00000569794 AREGP15514 252 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms