RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SPEGQ15772 3267 aa16.19■□□□□ 0.18
COMMD4-224ENST00000568877 RP1P56715 2156 aa16.19■□□□□ 0.18
COMMD4-224ENST00000568877 A0A1W2PPV9 198 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 SYCE1LA8MT33 242 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 TMX2-CTNND1H3BSU7 103 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 RGS16O15492 202 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-224ENST00000568877 PRICKLE3O43900 615 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-224ENST00000568877 CSO75390 466 aaKnown RBP16.18■□□□□ 0.18
COMMD4-224ENST00000568877 GSTA1P08263 222 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 RBP1P09455 135 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 THRAP10827 490 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 JUPP14923 745 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 UGT2B7P16662 529 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 OAS2P29728 719 aaKnown RBP16.18■□□□□ 0.18
COMMD4-224ENST00000568877 CCKBRP32239 447 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 HNMTP50135 292 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 PDX1P52945 283 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 INHBCP55103 352 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 TRA2AQ13595 282 aaKnown RBP eCLIP16.18■□□□□ 0.18
COMMD4-224ENST00000568877 ISXQ2M1V0 245 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 TECRLQ5HYJ1 363 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 CDKL4Q5MAI5 379 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 SNAP47Q5SQN1 464 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 PHF19Q5T6S3 580 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 SPESP1Q6UW49 350 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 TMPRSS7Q7RTY8 843 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 HDXQ7Z353 690 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 LRRC56Q8IYG6 542 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-224ENST00000568877 FLVCR1-AS1Q8TAF5 88 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 EXT2Q93063 718 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 ZBTB9Q96C00 473 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 RHBDF1Q96CC6 855 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 SCYL1Q96KG9 808 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 CCDC74BQ96LY2 380 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 ATG10Q9H0Y0 220 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 DCDC2Q9UHG0 476 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
COMMD4-224ENST00000568877 NCF1BA6NI72 391 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 A8MU76 341 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 NCF1CA8MVU1 366 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 TOX3O15405 576 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 KIF1CO43896 1103 aaKnown RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 RASSF9O75901 435 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 S100BP04271 92 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 NCF1P14598 390 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 SLC18A2Q05940 514 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 NAE1Q13564 534 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 TSTA3Q13630 321 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 ZXDCQ2QGD7 858 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 CACHD1Q5VU97 1274 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 SULT1C3Q6IMI6 304 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 SUSD1Q6UWL2 747 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 PRSS42Q7Z5A4 293 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 SRRM1Q8IYB3 904 aaKnown RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 CARFQ8N187 725 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 C4orf33Q8N1A6 199 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 TCAIMQ8N3R3 496 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 PDPRQ8NCN5 879 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 GRAMD1AQ96CP6 724 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 MAP3K3Q99759 626 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 MRPL57Q9BQC6 102 aaKnown RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 CENPHQ9H3R5 247 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 CCDC177Q9NQR7 707 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-224ENST00000568877 NUDT4Q9NZJ9 180 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 CD274Q9NZQ7 290 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 TMEM216Q9P0N5 145 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 XPR1Q9UBH6 696 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 PCDHB11Q9Y5F2 797 aa16.17■□□□□ 0.18
COMMD4-224ENST00000568877 FAM149AA5PLN7 773 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 TLCD2A6NGC4 264 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 SUPT3HB4E1H0 165 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 UBXN8O00124 270 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 COPEO14579 308 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 GLRA3O75311 464 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 SUPT3HO75486 399 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 MTHFD2P13995 350 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 CDH3P22223 829 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 CRHR1P34998 444 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 RPA3P35244 121 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-224ENST00000568877 CCT5P48643 541 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 TBPL1P62380 186 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 FOXC1Q12948 553 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 TARDBPQ13148 414 aaKnown RBP eCLIP16.16■□□□□ 0.18
COMMD4-224ENST00000568877 SF1Q15637 639 aaKnown RBP16.16■□□□□ 0.18
COMMD4-224ENST00000568877 SLC5A12Q1EHB4 618 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 C16orf46Q6P387 395 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 ARHGAP22Q7Z5H3 698 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 TRIM73Q86UV7 250 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 RCBTB1Q8NDN9 531 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 OR2A1Q8NGT9 310 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 OR56A3Q8NH54 315 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 PGM2Q96G03 612 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 MED8Q96G25 268 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 PPM1MQ96MI6 270 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 SGPP1Q9BX95 441 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 PITPNM3Q9BZ71 974 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 STRADBQ9C0K7 418 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 MRPL46Q9H2W6 279 aaKnown RBP16.16■□□□□ 0.18
COMMD4-224ENST00000568877 ZNF768Q9H5H4 540 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms