RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 DHRS4Q9BTZ2 278 aa13.9□□□□□ -0.18
CMTM3-215ENST00000568477 INTS10Q9NVR2 710 aaKnown RBP13.9□□□□□ -0.18
CMTM3-215ENST00000568477 TSR3Q9UJK0 312 aaKnown RBP13.9□□□□□ -0.18
CMTM3-215ENST00000568477 TLK1Q9UKI8 766 aa13.9□□□□□ -0.18
CMTM3-215ENST00000568477 RUVBL2Q9Y230 463 aaKnown RBP13.9□□□□□ -0.18
CMTM3-215ENST00000568477 PADI2Q9Y2J8 665 aa13.9□□□□□ -0.18
CMTM3-215ENST00000568477 KLHL20Q9Y2M5 609 aa13.9□□□□□ -0.18
CMTM3-215ENST00000568477 MAD1L1Q9Y6D9 718 aa13.9□□□□□ -0.18
CMTM3-215ENST00000568477 BSNQ9UPA5 3926 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 E5RI56 91 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 CBSLP0DN79 551 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 CBSP35520 551 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 KCNC4Q03721 635 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 CKAP4Q07065 602 aaKnown RBP13.89□□□□□ -0.19
CMTM3-215ENST00000568477 GBX1Q14549 363 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 PPP1R7Q15435 360 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 SF1Q15637 639 aaKnown RBP13.89□□□□□ -0.19
CMTM3-215ENST00000568477 ZNF385CQ66K41 422 aaPredicted RBP13.89□□□□□ -0.19
CMTM3-215ENST00000568477 RHBDD2Q6NTF9 364 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 PPIL6Q8IXY8 311 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 ZNF655Q8N720 491 aaPredicted RBP13.89□□□□□ -0.19
CMTM3-215ENST00000568477 NAT8LQ8N9F0 302 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 MAGEC3Q8TD91 643 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 ADAMTS17Q8TE56 1095 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 NDC1Q9BTX1 674 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 TRIM55Q9BYV6 548 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 CLMPQ9H6B4 373 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 TXLNGQ9NUQ3 528 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 EURLQ9NYK6 297 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 IL1RAPL1Q9NZN1 696 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 SPATA7Q9P0W8 599 aa13.89□□□□□ -0.19
CMTM3-215ENST00000568477 ZCWPW2A0A1B0GU75 182 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 ARGFXA6NJG6 315 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 ZNF185O15231 689 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 DNAJB5O75953 348 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 CTSBP07858 339 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 NR1D1P20393 614 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 CASRP41180 1078 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 PTGIRP43119 386 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 MAGEA3P43357 314 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 CSRP3P50461 194 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 TLE1Q04724 770 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 KLRB1Q12918 225 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 CHAF1BQ13112 559 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 LONRF1Q17RB8 773 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 TTLL9Q3SXZ7 439 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 CCSMST1Q4G0I0 132 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 ZC3H12BQ5HYM0 836 aaKnown RBP13.88□□□□□ -0.19
CMTM3-215ENST00000568477 C1orf189Q5VU69 101 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 CPZQ66K79 652 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 FIGLAQ6QHK4 219 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 ASB18Q6ZVZ8 466 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 RAB43Q86YS6 212 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 MCATQ8IVS2 390 aaKnown RBP13.88□□□□□ -0.19
CMTM3-215ENST00000568477 LMNTD2Q8IXW0 634 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 HMGCLL1Q8TB92 370 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 DLG3Q92796 817 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 GBP5Q96PP8 586 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 CCDC68Q9H2F9 335 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 ACSS2Q9NR19 701 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 C20orf96Q9NUD7 363 aaPredicted RBP13.88□□□□□ -0.19
CMTM3-215ENST00000568477 DHCR7Q9UBM7 475 aaKnown RBP13.88□□□□□ -0.19
CMTM3-215ENST00000568477 RNF14Q9UBS8 474 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 ASIC3Q9UHC3 531 aa13.88□□□□□ -0.19
CMTM3-215ENST00000568477 GPN3Q9UHW5 284 aaPredicted RBP13.88□□□□□ -0.19
CMTM3-215ENST00000568477 CTAGE15A4D2H0 777 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 KRT87PA6NCN2 255 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 K7EM74 188 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 PRICKLE3O43900 615 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-215ENST00000568477 USP1O94782 785 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 MATN4O95460 622 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 CTAGE8P0CG41 777 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 SLC1A2P43004 574 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 DCDP81605 110 aaKnown RBP13.87□□□□□ -0.19
CMTM3-215ENST00000568477 CTBP1Q13363 440 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 ACSBG2Q5FVE4 666 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 RNASEH2BQ5TBB1 312 aaKnown RBP13.87□□□□□ -0.19
CMTM3-215ENST00000568477 FAM69BQ5VUD6 431 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 MLIPQ5VWP3 458 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 CTAGE6Q86UF2 777 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 DENND6AQ8IWF6 608 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 CTAGE4Q8IX94 777 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 CALML6Q8TD86 181 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 DENND1AQ8TEH3 1009 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 ANKRD7Q92527 254 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 SIGLEC10Q96LC7 697 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 DDX47Q9H0S4 455 aaKnown RBP13.87□□□□□ -0.19
CMTM3-215ENST00000568477 ING2Q9H160 280 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 EPN3Q9H201 632 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 FBXO6Q9NRD1 293 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-215ENST00000568477 FAM114A2Q9NRY5 505 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 IFT80Q9P2H3 777 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-215ENST00000568477 GALPQ9UBC7 116 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 NDOR1Q9UHB4 597 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 ASH1LQ9NR48 2969 aaKnown RBP13.87□□□□□ -0.19
CMTM3-215ENST00000568477 FER1L5A0AVI2 2057 aa13.87□□□□□ -0.19
CMTM3-215ENST00000568477 RP1L1Q8IWN7 2480 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-215ENST00000568477 MED13Q9UHV7 2174 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 SETXQ7Z333 2677 aaKnown RBP13.86□□□□□ -0.19
CMTM3-215ENST00000568477 ARHGEF33A8MVX0 844 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms