RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FAM9CQ8IZT9 166 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 FAM110BQ8TC76 370 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 YY1AP1Q9H869 796 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 CDH7Q9ULB5 785 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 TMED5Q9Y3A6 229 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 SZT2Q5T011 3432 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 C1QTNF3-AMACRE9PGA6 284 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 NPC1O15118 1278 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 SLC16A8O95907 504 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 ZCCHC18P0CG32 403 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 PIM1P11309 404 aaPredicted RBP17.62■□□□□ 0.41
SMPD3-211ENST00000568373 PRPS2P11908 318 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 BMP2P12643 396 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 NCK1P16333 377 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 OXTRP30559 389 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 GJA4P35212 333 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 CLDN8P56748 225 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 PLIN5Q00G26 463 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 ZNF33BQ06732 778 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 NAE1Q13564 534 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 SELPLGQ14242 412 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 MARVELD2Q8N4S9 558 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 CLHC1Q8NHS4 586 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 MED8Q96G25 268 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 PKP4Q99569 1192 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 COQ10BQ9H8M1 238 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 PRSS16Q9NQE7 514 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 VAPAQ9P0L0 249 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 THAP10Q9P2Z0 257 aaPredicted RBP17.62■□□□□ 0.41
SMPD3-211ENST00000568373 USP22Q9UPT9 525 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 AP4B1Q9Y6B7 739 aa17.62■□□□□ 0.41
SMPD3-211ENST00000568373 CROCCQ5TZA2 2017 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 TCRBV5S2A0A599 114 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 H0YJX3 145 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 EPHX1P07099 455 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 ACPPP15309 386 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 PCSK2P16519 638 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 CD22P20273 847 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 MAPK1P28482 360 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 IMPA1P29218 277 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 CYP51A1Q16850 503 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 XKR6Q5GH73 641 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 OR52E8Q6IFG1 317 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 CAPRIN2Q6IMN6 1127 aaKnown RBP17.61■□□□□ 0.41
SMPD3-211ENST00000568373 RALGPS2Q86X27 583 aaPredicted RBP17.61■□□□□ 0.41
SMPD3-211ENST00000568373 PROSER1Q86XN7 944 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 ANKFN1Q8N957 763 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 OR56A3Q8NH54 315 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 APIPQ96GX9 242 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 HDAC8Q9BY41 377 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 PBX4Q9BYU1 374 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 TRIM39Q9HCM9 518 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 ZDHHC4Q9NPG8 344 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 HCN2Q9UL51 889 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 PCDHB3Q9Y5E6 796 aa17.61■□□□□ 0.41
SMPD3-211ENST00000568373 ANTXRLA6NF34 631 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 E7EQ34 232 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 DFNA5O60443 496 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 P2RY2P41231 377 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 OR4D2P58180 307 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 GRM2Q14416 872 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 CFAP206Q8IYR0 622 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 FBXO15Q8NCQ5 510 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-211ENST00000568373 RAB7BQ96AH8 199 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 MIEF2Q96C03 454 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 ZNF514Q96K75 400 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-211ENST00000568373 OR4K3Q96R72 315 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 OR52E6Q96RD3 313 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 MYCBPQ99417 103 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-211ENST00000568373 PIF1Q9H611 641 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 PDP2Q9P2J9 529 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 ATXN10Q9UBB4 475 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 CIDEBQ9UHD4 219 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 KANSL1LA0AUZ9 987 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 EPOPA6NHQ4 379 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 CLGNO14967 610 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 KAT7O95251 611 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 C1orf105O95561 183 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 UMPSP11172 480 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 AMD1P17707 334 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 SDC1P18827 310 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 HRH2P25021 359 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 SOX11P35716 441 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 PCDH1Q08174 1060 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 GTF2H3Q13889 308 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 DOC2AQ14183 400 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 NRF1Q16656 503 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 PPP2R2DQ66LE6 453 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 UGT2A3Q6UWM9 527 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 TRPV3Q8NET8 790 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 WDR20Q8TBZ3 569 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 CXorf40AQ8TE69 158 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 LINC00615Q96LM1 132 aaPredicted RBP17.6■□□□□ 0.41
SMPD3-211ENST00000568373 CIB1Q99828 191 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 NKX2-4Q9H2Z4 354 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 RPF2Q9H7B2 306 aaKnown RBP17.6■□□□□ 0.41
SMPD3-211ENST00000568373 AGPAT4Q9NRZ5 378 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 MAGEL2Q9UJ55 1249 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 MYO9BQ13459 2157 aa17.6■□□□□ 0.41
SMPD3-211ENST00000568373 TACR1P25103 407 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms