RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 RBBP4Q09028 425 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ELP6Q0PNE2 266 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 NR1D2Q14995 579 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 LAPTM4AQ15012 233 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 DUOXA1Q1HG43 343 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 SPIN4Q56A73 249 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 SDHAF4Q5VUM1 108 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF691Q5VV52 312 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 CPZQ66K79 652 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 OR2T5Q6IEZ7 315 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 SBSNQ6UWP8 590 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 PIWIL3Q7Z3Z3 882 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 DNAJB7Q7Z6W7 309 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 CIR1Q86X95 450 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 PLD3Q8IV08 490 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 SPARTQ8N0X7 666 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 CFAP52Q8N1V2 620 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 PARP8Q8N3A8 854 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 AMER2Q8N7J2 671 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 BEND7Q8N7W2 519 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 L3MBTL4Q8NA19 623 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 TRPV1Q8NER1 839 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 OR2T29Q8NH02 315 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 FBXO30Q8TB52 745 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 TBC1D15Q8TC07 691 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ASZ1Q8WWH4 475 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 TRIB2Q92519 343 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 MRPS31Q92665 395 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 CLP1Q92989 425 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 UBE2E3Q969T4 207 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 MUL1Q969V5 352 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 CRELD1Q96HD1 420 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 FBXL20Q96IG2 436 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 CPEB1Q9BZB8 566 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 CCDC90BQ9GZT6 254 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 KAT8Q9H7Z6 458 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF556Q9HAH1 456 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 BRF2Q9HAW0 419 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ABCB8Q9NUT2 735 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 INTS7Q9NVH2 962 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 DNAAF2Q9NVR5 837 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 SCHIP1Q9P0W5 487 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF282Q9UDV7 671 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 EBF1Q9UH73 591 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ENPP5Q9UJA9 477 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ERGIC3Q9Y282 383 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 WDR37Q9Y2I8 494 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 WBP11Q9Y2W2 641 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 MED16Q9Y2X0 877 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 SH3BP1Q9Y3L3 701 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 NAALAD2Q9Y3Q0 740 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 PCDHGB3Q9Y5G1 929 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 GMPPBQ9Y5P6 360 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 NLRC5Q86WI3 1866 aa7.45□□□□□ -1.22
ATXN3-250ENST00000568290 NYNRINQ9P2P1 1898 aaKnown RBP7.45□□□□□ -1.22
ATXN3-250ENST00000568290 ASPDHA6ND91 283 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 CLDN24A6NM45 220 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 MAGEB17A8MXT2 336 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 ARVCFO00192 962 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 TAF4O00268 1085 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 SLC1A7O00341 560 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 ENPP3O14638 875 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 PRRG1O14668 218 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 ANKRD28O15084 1053 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 COCHO43405 550 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 ZBTB11O95625 1053 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-250ENST00000568290 POP4O95707 220 aaKnown RBP7.44□□□□□ -1.22
ATXN3-250ENST00000568290 GUCA1CO95843 209 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 CATP04040 527 aaKnown RBP7.44□□□□□ -1.22
ATXN3-250ENST00000568290 GALTP07902 379 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 GNAO1P09471 354 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 CNPP09543 421 aaKnown RBP7.44□□□□□ -1.22
ATXN3-250ENST00000568290 BCKDHAP12694 445 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 CD40LGP29965 261 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 SLC6A4P31645 630 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 S100A5P33763 92 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 SOX6P35712 828 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 DCTP40126 519 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 PIK3CBP42338 1070 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 GSTM5P46439 218 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 ZFP36L2P47974 494 aaKnown RBP7.44□□□□□ -1.22
ATXN3-250ENST00000568290 SLC11A1P49279 550 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 GPR15P49685 360 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 ENTPD1P49961 510 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 KCNQ1P51787 676 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 PGGT1BP53609 377 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 MTPNP58546 118 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 DEFA1P59665 94 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 DEFA3P59666 94 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 COPZ1P61923 177 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 RPS24P62847 133 aaKnown RBP7.44□□□□□ -1.22
ATXN3-250ENST00000568290 SMAD3P84022 425 aaKnown RBP7.44□□□□□ -1.22
ATXN3-250ENST00000568290 ACSM2AQ08AH3 577 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 KCNAB2Q13303 367 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 CRHR2Q13324 411 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 LAPTM5Q13571 262 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 ABRAXAS2Q15018 415 aa7.44□□□□□ -1.22
ATXN3-250ENST00000568290 EIF4HQ15056 248 aaKnown RBP7.44□□□□□ -1.22
ATXN3-250ENST00000568290 PLCL1Q15111 1095 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms