RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 SHISA6Q6ZSJ9 500 aa11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 MRGPREQ86SM8 312 aa11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 CAND1Q86VP6 1230 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 RAB43Q86YS6 212 aa11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 RAD51AP1Q96B01 352 aa11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 BIRC8Q96P09 236 aa11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 DPH2Q9BQC3 489 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 SLC22A11Q9NSA0 550 aa11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 PADI2Q9Y2J8 665 aa11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 PCSK5Q92824 1860 aa11.74□□□□□ -0.53
GTF3C1-208ENST00000567843 A0A0J9YVX5 310 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 AP3B1O00203 1094 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 CTSVO60911 334 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 ALOX12BO75342 701 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 S1PR4O95977 384 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 EIF2S1P05198 315 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 ITGAXP20702 1163 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 RPS3P23396 243 aaKnown RBP eCLIP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 VSX2P58304 361 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 NEPROQ6NW34 567 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 CENPUQ71F23 418 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 LRRC6Q86X45 466 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 PROKR1Q8TCW9 393 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 DENND1AQ8TEH3 1009 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 SLC22A18Q96BI1 424 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 ZNF669Q96BR6 464 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 SLC30A3Q99726 388 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 SELENOSQ9BQE4 189 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 MRM3Q9HC36 420 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 MLXIPLQ9NP71 852 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 FBXO6Q9NRD1 293 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 HOMER3Q9NSC5 361 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 ABCF3Q9NUQ8 709 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 GPR83Q9NYM4 423 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 CCDC88CQ9P219 2028 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 MAP10Q9P2G4 905 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 PCDHGA9Q9Y5G4 932 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 MAU2Q9Y6X3 613 aa11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 PRRC2CQ9Y520 2896 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-208ENST00000567843 SPENQ96T58 3664 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CTAGE9A4FU28 777 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 PRICKLE3O43900 615 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CEACAM4O75871 244 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 UMODP07911 640 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 PKMP14618 531 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 GNLYP22749 145 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 COILP38432 576 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 OR1D4P47884 311 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 RRADP55042 308 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 SARNPP82979 210 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CDK16Q00536 496 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CTBP1Q13363 440 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CUL1Q13616 776 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 DHX34Q14147 1143 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 UBAP2LQ14157 1087 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 SSPNQ14714 243 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 TYSND1Q2T9J0 566 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 ANKRD20A4Q4UJ75 823 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 ZNF470Q6ECI4 717 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 KIAA0930Q6ICG6 404 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 FRMPD2BQ6IN97 320 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 MRPL14Q6P1L8 145 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CCDC137Q6PK04 289 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 SUSD1Q6UWL2 747 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 MED25Q71SY5 747 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 PPP1R32Q7Z5V6 425 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 ATCAYQ86WG3 371 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 DENND6AQ8IWF6 608 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 PRSS58Q8IYP2 241 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 EFCAB3Q8N7B9 438 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 TMEM102Q8N9M5 508 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CPT1CQ8TCG5 803 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 COG1Q8WTW3 980 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 FOPNLQ96NB1 174 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 DHRS4Q9BTZ2 278 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CHRNA10Q9GZZ6 450 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CUTCQ9NTM9 273 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 INTS7Q9NVH2 962 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 P4HTMQ9NXG6 502 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 SAMD15Q9P1V8 674 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 SRPK3Q9UPE1 567 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 ZNF451Q9Y4E5 1061 aa11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-208ENST00000567843 CNTRLQ7Z7A1 2325 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 LOC105369274A0A096LPK9 316 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 LOC102723532A0A0G2JNH3 316 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 A0A1B0GX78 115 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 A0A1W2PPV9 198 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 ARHGEF33A8MVX0 844 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 E5RI56 91 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 PEX12O00623 359 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 KPNA5O15131 536 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 NRDCO43847 1150 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 KIF5CO60282 957 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 MED26O95402 600 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 PAMP19021 973 aa11.71□□□□□ -0.53
GTF3C1-208ENST00000567843 THOC5Q13769 683 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms