RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 CPSF6Q16630 551 aaKnown RBP eCLIP18.71■□□□□ 0.59
PKD1-230ENST00000565639 SMU1Q2TAY7 513 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 UAP1L1Q3KQV9 507 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 ATP6AP1LQ52LC2 224 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 C6orf136Q5SQH8 315 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 PRAMEF9Q5VWM5 478 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 Q6ZSR6 202 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 PPFIBP2Q8ND30 876 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 RBM15BQ8NDT2 890 aaKnown RBP18.71■□□□□ 0.59
PKD1-230ENST00000565639 FAM174AQ8TBP5 190 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 INSM2Q96T92 566 aaPredicted RBP18.71■□□□□ 0.59
PKD1-230ENST00000565639 MIPEPQ99797 713 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 PCED1AQ9H1Q7 454 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 SPATA7Q9P0W8 599 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 GIMAP2Q9UG22 337 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 ZNF490Q9ULM2 529 aaPredicted RBP18.71■□□□□ 0.59
PKD1-230ENST00000565639 CCL27Q9Y4X3 112 aa18.71■□□□□ 0.59
PKD1-230ENST00000565639 LOC100653049A0A140TA62 436 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 A0A1W2PPC4 97 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 RGS14O43566 566 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 KRT34O76011 436 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 GNAZP19086 355 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 HNF4AP41235 474 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 CTBSQ01459 385 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 GRIK2Q13002 908 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 MAPRE2Q15555 327 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 SFRP1Q8N474 314 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 SETD7Q8WTS6 366 aaKnown RBP18.7■□□□□ 0.58
PKD1-230ENST00000565639 RLN3Q8WXF3 142 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 PPP3R2Q96LZ3 170 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 C12orf66Q96MD2 445 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 RTKNQ9BST9 563 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 CCDC177Q9NQR7 707 aaPredicted RBP18.7■□□□□ 0.58
PKD1-230ENST00000565639 SERTM1A2A2V5 107 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 ZNF839A8K0R7 811 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 STK25O00506 426 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 PI15O43692 258 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 FASTKQ14296 549 aaKnown RBP18.7■□□□□ 0.58
PKD1-230ENST00000565639 ZRSR2Q15696 482 aaKnown RBP18.7■□□□□ 0.58
PKD1-230ENST00000565639 DNAL1Q4LDG9 190 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 XKR6Q5GH73 641 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 WASH2PQ6VEQ5 465 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 SNX32Q86XE0 403 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 HMGCLL1Q8TB92 370 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 ELOVL6Q9H5J4 265 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 WASH6PQ9NQA3 447 aa18.7■□□□□ 0.58
PKD1-230ENST00000565639 SDR39U1Q9NRG7 319 aaPredicted RBP18.7■□□□□ 0.58
PKD1-230ENST00000565639 COL6A3P12111 3177 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 E7EQ34 232 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 LSM1O15116 133 aaKnown RBP18.69■□□□□ 0.58
PKD1-230ENST00000565639 GSC2O15499 205 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 NPPBP16860 134 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 SRP54P61011 504 aaKnown RBP18.69■□□□□ 0.58
PKD1-230ENST00000565639 EMX2Q04743 252 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 NR6A1Q15406 480 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 CYP2A13Q16696 494 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 GRHL2Q6ISB3 625 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 RGL4Q8IZJ4 473 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 OR13H1Q8NG92 308 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 IER2Q9BTL4 223 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 CADM1Q9BY67 442 aaKnown RBP18.69■□□□□ 0.58
PKD1-230ENST00000565639 MVB12BQ9H7P6 319 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 GPR27Q9NS67 375 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 AIG1Q9NVV5 245 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 TRNAU1APQ9NX07 287 aaKnown RBP18.69■□□□□ 0.58
PKD1-230ENST00000565639 TDRKHQ9Y2W6 561 aaKnown RBP18.69■□□□□ 0.58
PKD1-230ENST00000565639 DYRK1BQ9Y463 629 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 GPR45Q9Y5Y3 372 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 CFAP20Q9Y6A4 193 aaKnown RBP18.69■□□□□ 0.58
PKD1-230ENST00000565639 DGKBQ9Y6T7 804 aa18.69■□□□□ 0.58
PKD1-230ENST00000565639 PDZK1P1A8MUH7 402 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 KRT16P08779 473 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 GPX3P22352 226 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 CPOXP36551 454 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 MXRA7P84157 204 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 MTAPQ13126 283 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 DOC2AQ14183 400 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 KIF19Q2TAC6 998 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 FRG2Q64ET8 278 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 MIER2Q8N344 545 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 RAB42Q8N4Z0 105 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 FAM160A2Q8N612 972 aaPredicted RBP18.68■□□□□ 0.58
PKD1-230ENST00000565639 FRMD1Q8N878 549 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 FBXO27Q8NI29 283 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 SELENOMQ8WWX9 145 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 UTP4Q969X6 686 aaKnown RBP18.68■□□□□ 0.58
PKD1-230ENST00000565639 TSACCQ96A04 125 aaPredicted RBP18.68■□□□□ 0.58
PKD1-230ENST00000565639 WDR34Q96EX3 536 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 FRG2BQ96QU4 278 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 FERD3LQ96RJ6 166 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 HBEGFQ99075 208 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 ORAI3Q9BRQ5 295 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 MENTQ9BUN1 341 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 BRINP2Q9C0B6 783 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 EHD1Q9H4M9 534 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 FARSBQ9NSD9 589 aaKnown RBP18.68■□□□□ 0.58
PKD1-230ENST00000565639 TMEM45AQ9NWC5 275 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 PCOLCE2Q9UKZ9 415 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 SIT1Q9Y3P8 196 aa18.68■□□□□ 0.58
PKD1-230ENST00000565639 H0YIV9 168 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms