RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 C9orf43Q8TAL5 461 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 PWWP2AQ96N64 755 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 FOPNLQ96NB1 174 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 BIRC8Q96P09 236 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 EBNA1BP2Q99848 306 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 NAT9Q9BTE0 207 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 RAB17Q9H0T7 212 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SLC25A18Q9H1K4 315 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SYTL2Q9HCH5 934 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 PCMTD2Q9NV79 361 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 MAN2B2Q9Y2E5 1009 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 TNRC6AQ8NDV7 1962 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SEC16AO15027 2179 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 RASGRF2O14827 1237 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 PGAM1P18669 254 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 NR1D1P20393 614 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 PSMB5P28074 263 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 GRIA3P42263 894 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 ARL4CP56559 192 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 MPP1Q00013 466 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 CHAF1BQ13112 559 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 CUL1Q13616 776 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 IL10RAQ13651 578 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 HIF1AQ16665 826 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 BBS9Q3SYG4 887 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 ACSBG2Q5FVE4 666 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 CILP2Q8IUL8 1156 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 LURAP1LQ8IV03 231 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 IGDCC3Q8IVU1 814 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 DSELQ8IZU8 1212 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 ZBTB2Q8N680 514 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 ZNF655Q8N720 491 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 OR2L8Q8NGY9 312 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 RAD51AP1Q96B01 352 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 LRRC39Q96DD0 335 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 TCTN2Q96GX1 697 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 TCF12Q99081 682 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 CCDC68Q9H2F9 335 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 ADNPQ9H2P0 1102 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 DPH5Q9H2P9 285 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 IARS2Q9NSE4 1012 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 STARD5Q9NSY2 213 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 ABCF3Q9NUQ8 709 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 GRHL1Q9NZI5 618 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 DHCR7Q9UBM7 475 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 SNX7Q9UNH6 387 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 UTP11Q9Y3A2 253 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 PCDHGA6Q9Y5G7 932 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 KCNMB2Q9Y691 235 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 FAM169AQ9Y6X4 670 aa13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 USP9XQ93008 2570 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-204ENST00000565023 ANKRD12Q6UB98 2062 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 ARGFXA6NJG6 315 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 E7ESA3 106 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 H3BMM5 538 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 J3QKU1 62 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 DNAJB5O75953 348 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 TTC4O95801 387 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 S1PR4O95977 384 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 ESR1P03372 595 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 CBSLP0DN79 551 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 RORAP35398 523 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 CBSP35520 551 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 SLC1A2P43004 574 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 CALCOCO2Q13137 446 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 CRYMQ14894 314 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 LONRF1Q17RB8 773 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 KLHL38Q2WGJ6 581 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 MLIPQ5VWP3 458 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 C8orf74Q6P047 294 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 ABHD17AQ96GS6 310 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 SLC30A3Q99726 388 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 MIPEPQ99797 713 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 LRRC1Q9BTT6 524 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 MENTQ9BUN1 341 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 TXLNGQ9NUQ3 528 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 NDOR1Q9UHB4 597 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 TEX264Q9Y6I9 313 aa13.12□□□□□ -0.31
VPS9D1-204ENST00000565023 MED13Q9UHV7 2174 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 CTAGE15A4D2H0 777 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 C9J4A7 227 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 SYF2O95926 243 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 CTAGE8P0CG41 777 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 AGXTP21549 392 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 ELK3P41970 407 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 GABRA4P48169 554 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 FASTKQ14296 549 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 SPANXN3Q5MJ09 141 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 CPZQ66K79 652 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 FIGLAQ6QHK4 219 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 FAM198BQ6UWH4 519 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 SYVN1Q86TM6 617 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 CTAGE6Q86UF2 777 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 KCNMB4Q86W47 210 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 CTAGE4Q8IX94 777 aa13.11□□□□□ -0.31
VPS9D1-204ENST00000565023 LMNTD2Q8IXW0 634 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms