RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ILF3Q12906 894 aaKnown RBP eCLIP3.28□□□□□ -1.886e-9■■■■□ 20.7
CHD9-213ENST00000564845 CDH18Q13634 790 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 KCNJ11Q14654 390 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 RAB30Q15771 203 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 RGS9BPQ6ZS82 235 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 RBM15BQ8NDT2 890 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 SLCO2A1Q92959 643 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SIGLEC10Q96LC7 697 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 LRFN5Q96NI6 719 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 COQ7Q99807 217 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 POMKQ9H5K3 350 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZDHHC6Q9H6R6 413 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 XPR1Q9UBH6 696 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MMACHCQ9Y4U1 282 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SNX8Q9Y5X2 465 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 C5orf60A6NFR6 353 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ATP6V1G2O95670 118 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PIGRP01833 764 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 HMOX2P30519 316 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 VIPR1P32241 457 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CAPGP40121 348 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CORO7P57737 925 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 FOXL2P58012 376 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ELF3P78545 371 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 CYCSP99999 105 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 IL1RL1Q01638 556 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 FOXM1Q08050 763 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 FGL1Q08830 312 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MGAT3Q09327 533 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PCLAFQ15004 111 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PDK3Q15120 406 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SMU1Q2TAY7 513 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 FAM98BQ52LJ0 330 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZNF542PQ5EBM4 170 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 DCST1Q5T197 706 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SLC8B1Q6J4K2 584 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 FUT10Q6P4F1 479 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MTSS1LQ765P7 747 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CHST15Q7LFX5 561 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 ABHD12BQ7Z5M8 362 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 KCNMB4Q86W47 210 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 RHBDF1Q96CC6 855 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SLC7A6OSQ96CW6 309 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 VWCEQ96DN2 955 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 USB1Q9BQ65 265 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 MAN2B2Q9Y2E5 1009 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PCYT1BQ9Y5K3 369 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 MYLKQ15746 1914 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PRORSD1PA6NEY8 169 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 TBL1XO60907 577 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PEX11AO75192 247 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CLDN7O95471 211 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SNRPAP09012 282 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 MTHFD1P11586 935 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 CLK1P49759 484 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 DPYSQ14117 519 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 LRRC32Q14392 662 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 GRASPQ7Z6J2 395 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 C19orf18Q8NEA5 215 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 STON2Q8WXE9 905 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PCDH9Q9HC56 1237 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CD320Q9NPF0 282 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ITM2CQ9NQX7 267 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 A0A1W2PQ72 361 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 LRIT2A6NDA9 550 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 POLR1CO15160 346 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 SCN2BO60939 215 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ANP32DO95626 131 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 OAS1P00973 400 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 ADRA1BP35368 520 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CBX5P45973 191 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CCT3P49368 545 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 NUDT6P53370 316 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 FPGSQ05932 587 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 HNRNPDQ14103 355 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 CYP1B1Q16678 543 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SLC5A9Q2M3M2 681 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.28□□□□□ -1.883e-6■■■□□ 17.7
CHD9-213ENST00000564845 SIRPB2Q5JXA9 342 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 GRTP1Q5TC63 336 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PACRGLQ8N7B6 248 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SPPL2BQ8TCT7 592 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 LKAAEAR1Q8TD35 194 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SCAMP4Q969E2 229 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 KAT8Q9H7Z6 458 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 CRNNQ9UBG3 495 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 FBXW11Q9UKB1 542 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PCDHGA4Q9Y5G9 962 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 U3KQV3 271 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PATJQ8NI35 1801 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 KRBA1A5PL33 1030 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 K7ESM1 405 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CHADO15335 359 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SOX15O60248 233 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 NDUFS3O75489 264 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SUPT7LO94864 414 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 IGSF6O95976 241 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 THRAP10827 490 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MYL12AP19105 171 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms