RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CCDC90BQ9GZT6 254 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 KAT8Q9H7Z6 458 aaKnown RBP7.45□□□□□ -1.22
ATXN3-249ENST00000564606 ZNF556Q9HAH1 456 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 BRF2Q9HAW0 419 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 ABCB8Q9NUT2 735 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 INTS7Q9NVH2 962 aaKnown RBP7.45□□□□□ -1.22
ATXN3-249ENST00000564606 DNAAF2Q9NVR5 837 aaKnown RBP7.45□□□□□ -1.22
ATXN3-249ENST00000564606 SCHIP1Q9P0W5 487 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-249ENST00000564606 ZNF282Q9UDV7 671 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-249ENST00000564606 EBF1Q9UH73 591 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 ENPP5Q9UJA9 477 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 ERGIC3Q9Y282 383 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 WDR37Q9Y2I8 494 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 WBP11Q9Y2W2 641 aaKnown RBP7.45□□□□□ -1.22
ATXN3-249ENST00000564606 MED16Q9Y2X0 877 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 FCF1Q9Y324 198 aaKnown RBP7.45□□□□□ -1.22
ATXN3-249ENST00000564606 SH3BP1Q9Y3L3 701 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 NAALAD2Q9Y3Q0 740 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 PCDHGB3Q9Y5G1 929 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 GMPPBQ9Y5P6 360 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 NLRC5Q86WI3 1866 aa7.45□□□□□ -1.22
ATXN3-249ENST00000564606 NYNRINQ9P2P1 1898 aaKnown RBP7.45□□□□□ -1.22
ATXN3-249ENST00000564606 ASPDHA6ND91 283 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 CLDN24A6NM45 220 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 MAGEB17A8MXT2 336 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ARVCFO00192 962 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 TAF4O00268 1085 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SLC1A7O00341 560 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ENPP3O14638 875 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PRRG1O14668 218 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ANKRD28O15084 1053 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 COCHO43405 550 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ZBTB11O95625 1053 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 POP4O95707 220 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 GUCA1CO95843 209 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 CATP04040 527 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 GALTP07902 379 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 GNAO1P09471 354 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 CNPP09543 421 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 BCKDHAP12694 445 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 CD40LGP29965 261 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SLC6A4P31645 630 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 S100A5P33763 92 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SOX6P35712 828 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 DCTP40126 519 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PIK3CBP42338 1070 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 GSTM5P46439 218 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ZFP36L2P47974 494 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SLC11A1P49279 550 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 GPR15P49685 360 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ENTPD1P49961 510 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 KCNQ1P51787 676 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PGGT1BP53609 377 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 MTPNP58546 118 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 DEFA1P59665 94 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 DEFA3P59666 94 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 COPZ1P61923 177 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 RPS24P62847 133 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SMAD3P84022 425 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ACSM2AQ08AH3 577 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 KCNAB2Q13303 367 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 CRHR2Q13324 411 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 LAPTM5Q13571 262 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ABRAXAS2Q15018 415 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 EIF4HQ15056 248 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PLCL1Q15111 1095 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PON2Q15165 354 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 HIST2H2ACQ16777 129 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 LINC01559Q495D7 138 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 RFTN2Q52LD8 501 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 USP39Q53GS9 565 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SETMARQ53H47 684 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PAGE2BQ5JRK9 111 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 GPRC6AQ5T6X5 926 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ACSM2BQ68CK6 577 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 HIST2H2AA3Q6FI13 130 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ANKRD26P1Q6NSI1 321 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 GCNT7Q6ZNI0 430 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 TPGS1Q6ZTW0 290 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 UBE2R2Q712K3 238 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 EIF3MQ7L2H7 374 aaKnown RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 RTL10Q7L3V2 364 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PRSS48Q7RTY5 328 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 P2RY8Q86VZ1 359 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 RALGPS2Q86X27 583 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 CALHM3Q86XJ0 350 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SYT12Q8IV01 421 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 PIANPQ8IYJ0 282 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 RGL4Q8IZJ4 473 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 OFCC1Q8IZS5 231 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 ZBTB8BQ8NAP8 495 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SLC43A3Q8NBI5 491 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 KBTBD8Q8NFY9 601 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 OR2AP1Q8NGE2 309 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 OR52B6Q8NGF0 335 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 OR8J2Q8NGG1 315 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 OR2T11Q8NH01 316 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 RNF217Q8TC41 542 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 HCAR2Q8TDS4 363 aa7.44□□□□□ -1.22
ATXN3-249ENST00000564606 SNX19Q92543 992 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms