RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CPNE7Q9UBL6 633 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 LNPEPQ9UIQ6 1025 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
SPG7-209ENST00000564047 LOC400499M0QZD8 3231 aa12.53□□□□□ -0.4
SPG7-209ENST00000564047 TRBV23OR9-2A0A075B6M9 112 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 ZNF839A8K0R7 811 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 KLF11O14901 512 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 NOBOXO60393 691 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 SLC16A8O95907 504 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 VIPP01282 170 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 SERPINE1P05121 402 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 ZNF806P0C7X5 589 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 C1QTNF9P0C862 333 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 ERGP11308 486 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 BGNP21810 368 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 GRK2P25098 689 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 SERPINB5P36952 375 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 NAGLUP54802 743 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 CCDC6Q16204 474 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 CYP2A13Q16696 494 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 LACTB2Q53H82 288 aaPredicted RBP12.52□□□□□ -0.41
SPG7-209ENST00000564047 ZNF678Q5SXM1 525 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 C6orf132Q5T0Z8 1188 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 ATG16L1Q676U5 607 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 ANKS6Q68DC2 871 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 AGTRAPQ6RW13 159 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 RGS9BPQ6ZS82 235 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 CCDC121Q6ZUS5 278 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 GPR156Q8NFN8 814 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 OR52E1Q8NGJ3 308 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 PPP1R14CQ8TAE6 165 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 LRRC8CQ8TDW0 803 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 ZNF480Q8WV37 535 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 PATE1Q8WXA2 126 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 ZNF75CPQ92670 426 aaPredicted RBP12.52□□□□□ -0.41
SPG7-209ENST00000564047 COL26A1Q96A83 441 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 TMEM79Q9BSE2 394 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 MENTQ9BUN1 341 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 DUSP23Q9BVJ7 150 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 GATA5Q9BWX5 397 aaPredicted RBP12.52□□□□□ -0.41
SPG7-209ENST00000564047 CD244Q9BZW8 370 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 SMOC1Q9H4F8 434 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 STN1Q9H668 368 aaKnown RBP12.52□□□□□ -0.41
SPG7-209ENST00000564047 MANSC1Q9H8J5 431 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 NLGN3Q9NZ94 848 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 AKAP13Q12802 2813 aa12.52□□□□□ -0.41
SPG7-209ENST00000564047 PRAMEF33A0A0G2JMD5 474 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 KRT87PA6NCN2 255 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 TMEM114B3SHH9 223 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 K7EPI3 171 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 TM4SF5O14894 197 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 PCDHGA12O60330 932 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 NPHS1O60500 1241 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 STK16O75716 305 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 SIX3O95343 332 aaPredicted RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 RPS17P08708 135 aaKnown RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 ZNF883P0CG24 379 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 ALPPL2P10696 532 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 EEF1DP29692 281 aaKnown RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 PKLRP30613 574 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 FASLGP48023 281 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 SLC6A12P48065 614 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 HSPA7P48741 367 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 AGTR2P50052 363 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 RAB28P51157 221 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 ATXN3P54252 364 aaPredicted RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 PNLIPRP1P54315 467 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 STX3Q13277 289 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 ZXDCQ2QGD7 858 aaPredicted RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 C18orf21Q32NC0 220 aaPredicted RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 PTCHD3Q3KNS1 767 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 C14orf28Q4W4Y0 310 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 UNC50Q53HI1 259 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 CFAP157Q5JU67 520 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 LRRC70Q7Z2Q7 622 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 SFTPA2Q8IWL1 248 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 SYTL1Q8IYJ3 562 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 ARL14Q8N4G2 192 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 CCNYL1Q8N7R7 359 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 ARL10Q8N8L6 244 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 KDF1Q8NAX2 398 aaPredicted RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 OR56A3Q8NH54 315 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 HMGCLL1Q8TB92 370 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 SH3KBP1Q96B97 665 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 CNDP1Q96KN2 507 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 GTPBP2Q9BX10 602 aaKnown RBP12.51□□□□□ -0.41
SPG7-209ENST00000564047 UCK1Q9HA47 277 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 CIDEBQ9UHD4 219 aa12.51□□□□□ -0.41
SPG7-209ENST00000564047 PCDH15Q96QU1 1955 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 FLNBO75369 2602 aaKnown RBP12.5□□□□□ -0.41
SPG7-209ENST00000564047 FAM221BA6H8Z2 402 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 LRRC14BA6NHZ5 514 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 E7ENX8 843 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 E2F3O00716 465 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 SUPT7LO94864 414 aa12.5□□□□□ -0.41
SPG7-209ENST00000564047 SNUPNO95149 360 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms