RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 NUS1Q96E22 293 aa9.54□□□□□ -0.88
SMG1-205ENST00000561947 NSMCE2Q96MF7 247 aa9.54□□□□□ -0.88
SMG1-205ENST00000561947 GBP5Q96PP8 586 aa9.54□□□□□ -0.88
SMG1-205ENST00000561947 TRAPPC9Q96Q05 1148 aa9.54□□□□□ -0.88
SMG1-205ENST00000561947 OR52E6Q96RD3 313 aa9.54□□□□□ -0.88
SMG1-205ENST00000561947 STOX2Q9P2F5 926 aaPredicted RBP9.54□□□□□ -0.88
SMG1-205ENST00000561947 SAC3D1A6NKF1 404 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 SOCS2O14508 198 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 TPST1O60507 370 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 RECQL5O94762 991 aaPredicted RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 ADRB3P13945 408 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 PSMC3P17980 439 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 PBLDP30039 288 aaPredicted RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 ZNF33BQ06732 778 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CYP4F3Q08477 520 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 GK3PQ14409 553 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 PDGFRLQ15198 375 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CCSMST1Q4G0I0 132 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 ZNF658BQ4V348 819 aaPredicted RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 FOXB2Q5VYV0 432 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 AGTRAPQ6RW13 159 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CHERPQ8IWX8 916 aaKnown RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 MSRB3Q8IXL7 192 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 TBC1D21Q8IYX1 336 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 DTWD1Q8N5C7 304 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 AADATQ8N5Z0 425 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 DNAJB8Q8NHS0 232 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 FOXJ1Q92949 421 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 APIPQ96GX9 242 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CENPNQ96H22 339 aaPredicted RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 PPP1R16AQ96I34 528 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 FOPNLQ96NB1 174 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 ZNF583Q96ND8 569 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CCDC115Q96NT0 180 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 FAM129BQ96TA1 746 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 ZCCHC2Q9C0B9 1178 aaKnown RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 FAM192AQ9GZU8 254 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 TMEM245Q9H330 911 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 HPS4Q9NQG7 708 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 OBP2AQ9NY56 170 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 PCDHGB4Q9UN71 923 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 PCDHGB5Q9Y5G0 923 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 FAM149AA5PLN7 773 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 E7EQ34 232 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 PLK4O00444 970 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 MAP3K13O43283 966 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 LILRB5O75023 590 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 FAM58BPP0C7Q3 252 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 SMIM18P0DKX4 95 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 C6P13671 934 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 AMD1P17707 334 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 SDC1P18827 310 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 GGT1P19440 569 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CD22P20273 847 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 PAX7P23759 505 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CCT8P50990 548 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 TXNL4AP83876 142 aaKnown RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 MYBPC1Q00872 1141 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CSTF3Q12996 717 aaKnown RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 NAE1Q13564 534 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 RUNDC3AQ59EK9 446 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 XKR6Q5GH73 641 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 GET4Q7L5D6 327 aaPredicted RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 TRIM74Q86UV6 250 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 EPHX4Q8IUS5 362 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 SFTPA1Q8IWL2 248 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 TERB1Q8NA31 727 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 ST13P5Q8NFI4 369 aaPredicted RBP9.53□□□□□ -0.88
SMG1-205ENST00000561947 FCRL1Q96LA6 429 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 PKP4Q99569 1192 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 CERS4Q9HA82 394 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 SLC25A37Q9NYZ2 338 aa9.53□□□□□ -0.88
SMG1-205ENST00000561947 TRBV5-3A0A0A0MS03 114 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 ARHGAP10A1A4S6 786 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 K7ESM1 405 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 CLGNO14967 610 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 NPC1O15118 1278 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 LZTS3O60299 673 aaPredicted RBP9.52□□□□□ -0.88
SMG1-205ENST00000561947 TNFAIP8O95379 198 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 ANXA6P08133 673 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 CDH1P12830 882 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 FCARP24071 287 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 TACR1P25103 407 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 IMPA1P29218 277 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 PDHA2P29803 388 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 S100A3P33764 101 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 GPR1P46091 355 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 PHC1P78364 1004 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 PCDH1Q08174 1060 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 ATP6AP1Q15904 470 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 TMEM52BQ4KMG9 183 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 C9orf50Q5SZB4 431 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 RAET1GQ6H3X3 334 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 GRHL2Q6ISB3 625 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 DNAJC14Q6Y2X3 702 aaPredicted RBP9.52□□□□□ -0.88
SMG1-205ENST00000561947 DNAJC5GQ8N7S2 189 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 OR2T12Q8NG77 320 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 OR56A3Q8NH54 315 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 WDR20Q8TBZ3 569 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms