RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CLPPQ16740 277 aaPredicted RBP9.94□□□□□ -0.82
LRRC28-221ENST00000561276 SNAP47Q5SQN1 464 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 CDCP2Q5VXM1 449 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 AGTRAPQ6RW13 159 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 RBM44Q6ZP01 1051 aaKnown RBP9.94□□□□□ -0.82
LRRC28-221ENST00000561276 FAM92BQ6ZTR7 304 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 TAX1BP1Q86VP1 789 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 LCA5Q86VQ0 697 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 SRRM1Q8IYB3 904 aaKnown RBP9.94□□□□□ -0.82
LRRC28-221ENST00000561276 SYTL1Q8IYJ3 562 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 C4orf33Q8N1A6 199 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 TMEM151AQ8N4L1 468 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 OR4D9Q8NGE8 314 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 ADAMTS14Q8WXS8 1223 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 FBXL8Q96CD0 374 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 PGM2Q96G03 612 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 ZDHHC12Q96GR4 267 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 TGM7Q96PF1 710 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 OR2A14Q96R47 310 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 ATOH8Q96SQ7 321 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 RUFY1Q96T51 708 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 EGFL8Q99944 293 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 DPYSL5Q9BPU6 564 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 TWSG1Q9GZX9 223 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 ZMYND15Q9H091 742 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 SEMA6CQ9H3T2 930 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 ABCF3Q9NUQ8 709 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 INTS7Q9NVH2 962 aaKnown RBP9.94□□□□□ -0.82
LRRC28-221ENST00000561276 ACTR10Q9NZ32 417 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 CD274Q9NZQ7 290 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 PDP2Q9P2J9 529 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 KLHL3Q9UH77 587 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 ENTPD2Q9Y5L3 495 aa9.94□□□□□ -0.82
LRRC28-221ENST00000561276 GOLGA4Q13439 2230 aaKnown RBP9.94□□□□□ -0.82
LRRC28-221ENST00000561276 IGHV5-10-1A0A0J9YXX1 117 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 A0A1W2PPV9 198 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 SYCE1LA8MT33 242 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 AGPSO00116 658 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 UBXN8O00124 270 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 MATN2O00339 956 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 COPEO14579 308 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 KIF1CO43896 1103 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 GLRA3O75311 464 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 MYZAPP0CAP1 466 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 MTHFD2P13995 350 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 JUPP14923 745 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 CREB1P16220 341 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 OAS2P29728 719 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 PEBP1P30086 187 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 CRHR1P34998 444 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 HNMTP50135 292 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 KPNA2P52292 529 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 ZFP36L1Q07352 338 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 NAE1Q13564 534 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 TSTA3Q13630 321 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 KIR2DS3Q14952 304 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 SF1Q15637 639 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 TNFAIP8L3Q5GJ75 292 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 TECRLQ5HYJ1 363 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 CDKL4Q5MAI5 379 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 HES3Q5TGS1 186 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 CACHD1Q5VU97 1274 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 SULT1C3Q6IMI6 304 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 C16orf46Q6P387 395 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 CDHR3Q6ZTQ4 885 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 B3GNT8Q7Z7M8 397 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 EXOC3L1Q86VI1 746 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 TMPRSS12Q86WS5 348 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 LRRC56Q8IYG6 542 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 CHCHD4Q8N4Q1 142 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 OR2A1Q8NGT9 310 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 FLVCR1-AS1Q8TAF5 88 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 ATL1Q8WXF7 558 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 SMPDL3AQ92484 453 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 EXT2Q93063 718 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 ESAMQ96AP7 390 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 SLC22A18Q96BI1 424 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 ALKBH8Q96BT7 664 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 PYCR2Q96C36 320 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 RHBDF1Q96CC6 855 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 MED8Q96G25 268 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 MAP3K3Q99759 626 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 MRPL57Q9BQC6 102 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 VIPAS39Q9H9C1 493 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 TMBIM4Q9HC24 238 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 CPSF2Q9P2I0 782 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 PTBP2Q9UKA9 531 aaKnown RBP9.93□□□□□ -0.82
LRRC28-221ENST00000561276 GRID1Q9ULK0 1009 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 CLCA2Q9UQC9 943 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 PCDHB11Q9Y5F2 797 aa9.93□□□□□ -0.82
LRRC28-221ENST00000561276 SNRNP200O75643 2136 aaKnown RBP9.92□□□□□ -0.82
LRRC28-221ENST00000561276 MN1Q10571 1320 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-221ENST00000561276 IGHV5-51A0A0C4DH38 117 aa9.92□□□□□ -0.82
LRRC28-221ENST00000561276 GOLGA6L10A6NI86 522 aa9.92□□□□□ -0.82
LRRC28-221ENST00000561276 SUPT3HB4E1H0 165 aa9.92□□□□□ -0.82
LRRC28-221ENST00000561276 TARM1B6A8C7 271 aa9.92□□□□□ -0.82
LRRC28-221ENST00000561276 TOX3O15405 576 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-221ENST00000561276 TAPBPO15533 448 aa9.92□□□□□ -0.82
LRRC28-221ENST00000561276 CSO75390 466 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms