RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 LRRC56Q8IYG6 542 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 CACNA2D3Q8IZS8 1091 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 NLGN4XQ8N0W4 816 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 DNAJC22Q8N4W6 341 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 GPATCH11Q8N954 259 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 C19orf47Q8N9M1 422 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 NLGN4YQ8NFZ3 816 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 OR2A1Q8NGT9 310 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 OR8K5Q8NH50 307 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 OR1L3Q8NH93 324 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 FAM45AQ8TCE6 357 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 ULBP3Q9BZM4 244 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 RHOJQ9H4E5 214 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 SYTL2Q9HCH5 934 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 FAM114A2Q9NRY5 505 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 ADAMTS6Q9UKP5 1117 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 LHX6Q9UPM6 363 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 KLHL20Q9Y2M5 609 aa14.72□□□□□ -0.05
SNRPA1-213ENST00000560856 LOC101059948A0A1B0GTJ6 334 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 WISP3O95389 354 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 MAGP20916 626 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 MAP4P27816 1152 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 PSMB5P28074 263 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 OAS2P29728 719 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 TMPRSS3P57727 454 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 TAS2R39P59534 338 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 YBX1P67809 324 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 VAC14Q08AM6 782 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 ARHGAP19Q14CB8 494 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 MANEAQ5SRI9 462 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 PRAMEF17Q5VTA0 474 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 KIAA1614Q5VZ46 1190 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 FCRL6Q6DN72 434 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 CYB5D1Q6P9G0 228 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 CEP112Q8N8E3 955 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 SLC38A9Q8NBW4 561 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 GALNT6Q8NCL4 622 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 ZNF480Q8WV37 535 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 SLC22A18Q96BI1 424 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 TCTN2Q96GX1 697 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 PDLIM5Q96HC4 596 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 SLC12A9Q9BXP2 914 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 AKIRIN1Q9H9L7 192 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 NSMCE4AQ9NXX6 385 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 LNPEPQ9UIQ6 1025 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 KLK4Q9Y5K2 254 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 PCM1Q15154 2024 aa14.71□□□□□ -0.05
SNRPA1-213ENST00000560856 FAM95CA0A1B0GW59 222 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 E7ENX8 843 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 TERTO14746 1132 aaKnown RBP14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 ZBTB14O43829 449 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 FKBP9O95302 570 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 SLC16A8O95907 504 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 NTRK1P04629 796 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 CTSBP07858 339 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 RGS4P49798 205 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 ATP1A2P50993 1020 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 CXADRP78310 365 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 TAP2Q03519 686 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 ABHD18Q0P651 414 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 KBTBD12Q3ZCT8 623 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 UBAP2Q5T6F2 1119 aaKnown RBP14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 LRRC8EQ6NSJ5 796 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 FIGLAQ6QHK4 219 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 C6orf15Q6UXA7 325 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 UBE2R2Q712K3 238 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 RELL1Q8IUW5 271 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 CEP97Q8IW35 865 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 LRRN4CLQ8ND94 238 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 OR2L3Q8NG85 312 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 LINGO1Q96FE5 620 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 VPS39Q96JC1 886 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 FAM129AQ9BZQ8 928 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 IKZF3Q9UKT9 509 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 PDE10AQ9Y233 779 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 MTO1Q9Y2Z2 717 aaKnown RBP14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 ANKRD12Q6UB98 2062 aa14.7□□□□□ -0.06
SNRPA1-213ENST00000560856 IGSF10Q6WRI0 2623 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 TMEM150CB9EJG8 249 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 SLC16A5O15375 505 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 C8GP07360 202 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 LIFP15018 202 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 F8A1P23610 371 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 IMPA1P29218 277 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 HSD17B2P37059 387 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 STAT5AP42229 794 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 GRIA3P42263 894 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 PNLIPRP1P54315 467 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 IL2P60568 153 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 PDAP1Q13442 181 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 SF1Q15637 639 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 PHKG1Q16816 387 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 ZXDCQ2QGD7 858 aaPredicted RBP14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 DEFB110Q30KQ9 67 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 ARHGAP40Q5TG30 622 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 SUSD1Q6UWL2 747 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 ZNF517Q6ZMY9 492 aaPredicted RBP14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 CCDC81Q6ZN84 652 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 RAB42Q8N4Z0 105 aa14.69□□□□□ -0.06
SNRPA1-213ENST00000560856 ESX1Q8N693 406 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms