RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 HMBSP08397 361 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 RPS17P08708 135 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 LAMP2P13473 410 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF37AP17032 561 aaPredicted RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 HMGA1P17096 107 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 CD247P20963 164 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 NFKBIAP25963 317 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 MAPK1P28482 360 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 OXTRP30559 389 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 TIE1P35590 1138 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ATP5C1P36542 298 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 GMPRP36959 345 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 CCR10P46092 362 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 GPR15P49685 360 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 TPTEP56180 551 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 WNT3AP56704 352 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 TBX4P57082 545 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SH3BP2P78314 561 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 PITX1P78337 314 aaPredicted RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 NTHL1P78549 312 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 IL5RAQ01344 420 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 CSTF3Q12996 717 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 TAF12Q16514 161 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 CTF1Q16619 201 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 PROX2Q3B8N5 592 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SPANXN2Q5MJ10 180 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 HECTD3Q5T447 861 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 CLEC6AQ6EIG7 209 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 DENND5AQ6IQ26 1287 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ERICH5Q6P6B1 374 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SHQ1Q6PI26 577 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 AFTPHQ6ULP2 937 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 GPRIN3Q6ZVF9 776 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 GET4Q7L5D6 327 aaPredicted RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 IFNEQ86WN2 208 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 UBALD2Q8IYN6 164 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 STK40Q8N2I9 435 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 MFSD4AQ8N468 514 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 TTC9BQ8N6N2 239 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 FNDC5Q8NAU1 212 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 OR9I1Q8NGQ6 314 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 OR6P1Q8NGX9 317 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 DNAJB14Q8TBM8 379 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 DYNC2LI1Q8TCX1 351 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SLC38A4Q969I6 547 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 PSMG2Q969U7 264 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF486Q96H40 463 aaPredicted RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 CRELD1Q96HD1 420 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 TRIB3Q96RU7 358 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 MYADMQ96S97 322 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SEPHS2Q99611 448 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 APOL2Q9BQE5 337 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 DGCR6LQ9BY27 220 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ITPAQ9BY32 194 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 MUC3BQ9H195 1237 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 DUSP21Q9H596 190 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SLA2Q9H6Q3 261 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ACTR8Q9H981 624 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 KCNK12Q9HB15 430 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ATP13A1Q9HD20 1204 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 HCFC1R1Q9NWW0 138 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 OSER1Q9NX31 292 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ASIC5Q9NY37 505 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 NUDT4Q9NZJ9 180 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 MARCH2Q9P0N8 246 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 COX16Q9P0S2 106 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 DNMT3BQ9UBC3 853 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ZMYM5Q9UJ78 669 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 DNMT3LQ9UJW3 386 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 INTS6Q9UL03 887 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 MFHAS1Q9Y4C4 1052 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 INSL5Q9Y5Q6 135 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ZFP37Q9Y6Q3 630 aaPredicted RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 FAM208BQ5VWN6 2430 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 NCOR2Q9Y618 2525 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 NAV2Q8IVL1 2488 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 MYO15AQ9UKN7 3530 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF840PA6NDX5 716 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 MROH6A6NGR9 719 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 AGAP5A6NIR3 686 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 M0R296 226 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 HS6ST1O60243 411 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 KLK8O60259 260 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 TLR5O60602 858 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 TRIM3O75382 744 aaPredicted RBP8.35□□□□□ -1.07
CCDC33-209ENST00000560565 WDR47O94967 919 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 ZIC2O95409 532 aaPredicted RBP8.35□□□□□ -1.07
CCDC33-209ENST00000560565 LATS1O95835 1130 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 DLGAP3O95886 979 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 OTCP00480 354 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 PCMT1P22061 227 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 IGFBP5P24593 272 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 ARNTP27540 789 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 HTR1BP28222 390 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 ELK4P28324 431 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 KRT20P35900 424 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 ETV6P41212 452 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 EIF2DP41214 584 aaKnown RBP8.35□□□□□ -1.07
CCDC33-209ENST00000560565 ABCG1P45844 678 aa8.35□□□□□ -1.07
CCDC33-209ENST00000560565 ALDH9A1P49189 494 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms