RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 HNF4AP41235 474 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 CASP2P42575 452 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 IDH3AP50213 366 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 ERVPABLB-1P60509 514 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 HNRNPKP61978 463 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 TBPL1P62380 186 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 TAP2Q03519 686 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 BTKQ06187 659 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 E2F2Q14209 437 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 KIR2DS5Q14953 304 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 ELOCQ15369 112 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 TBCCQ15814 346 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 CYP2A13Q16696 494 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 SLC9B1Q4ZJI4 515 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 FAM91A1Q658Y4 838 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 PMS2CLQ68D20 193 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 CLEC6AQ6EIG7 209 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 TSSK4Q6SA08 328 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 LCTLQ6UWM7 567 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 MAVSQ7Z434 540 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 YTHDF3Q7Z739 585 aaKnown RBP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 NRROSQ86YC3 692 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 RBM12BQ8IXT5 1001 aaKnown RBP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 LRRC56Q8IYG6 542 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 MAML2Q8IZL2 1156 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 FBXL6Q8N531 539 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 SNX31Q8N9S9 440 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 L3MBTL4Q8NA19 623 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 AVL9Q8NBF6 648 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 OR52B6Q8NGF0 335 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 METTL6Q8TCB7 284 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 ACTRT2Q8TDY3 377 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 TWIST2Q8WVJ9 160 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 CCT6BQ92526 530 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 NELL1Q92832 810 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 PYCR2Q96C36 320 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 CXorf40BQ96DE9 158 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 MED8Q96G25 268 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 ZC3H10Q96K80 434 aaKnown RBP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 EBF4Q9BQW3 602 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 HAUS8Q9BT25 410 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 NUF2Q9BZD4 464 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 MIR1-1HGQ9H1L0 117 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 ACTR8Q9H981 624 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 ERVMER34-1Q9H9K5 563 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 IMP3Q9NV31 184 aaKnown RBP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 TBC1D29Q9UFV1 150 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 SUSD2Q9UGT4 822 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 APOBEC3BQ9UH17 382 aaKnown RBP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 TDRKHQ9Y2W6 561 aaKnown RBP8.35□□□□□ -1.07
TRAF3-209ENST00000560463 FIS1Q9Y3D6 152 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 DNAJC15Q9Y5T4 150 aa8.35□□□□□ -1.07
TRAF3-209ENST00000560463 DNAH14Q0VDD8 3507 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 LAMA1P25391 3075 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SERTM1A2A2V5 107 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 TMEM233B4DJY2 109 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SDHDO14521 159 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SKAP2O75563 359 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-209ENST00000560463 WFS1O76024 890 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 KRT6AP02538 564 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 KRT6BP04259 564 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 CAPN1P07384 714 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 JUPP14923 745 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 NPPBP16860 134 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 ITPKAP23677 461 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 AK4P27144 223 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-209ENST00000560463 HOXD12P35452 270 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 ARL1P40616 181 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-209ENST00000560463 KRT6CP48668 564 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 RAB28P51157 221 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 FOXA1P55317 472 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 C21orf59P57076 290 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 NXPH1P58417 271 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SF3A3Q12874 501 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRAF3-209ENST00000560463 IFT88Q13099 833 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 CHIT1Q13231 466 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 PRKG2Q13237 762 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 TUBB3Q13509 450 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 LAPTM5Q13571 262 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 PDCD2Q16342 344 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-209ENST00000560463 PRRT3Q5FWE3 981 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 C10orf62Q5T681 223 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-209ENST00000560463 LYSMD4Q5XG99 296 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 LETMD1Q6P1Q0 360 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 IYDQ6PHW0 289 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SLC30A9Q6PML9 568 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 CCDC121Q6ZUS5 278 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 RABEPKQ7Z6M1 372 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 TAF8Q7Z7C8 310 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 MTDHQ86UE4 582 aaKnown RBP8.34□□□□□ -1.07
TRAF3-209ENST00000560463 GKN2Q86XP6 184 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 FITM2Q8N6M3 262 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 CDYL2Q8N8U2 506 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 TMEM105Q8N8V8 129 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 OR2L8Q8NGY9 312 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 MAPK15Q8TD08 544 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 SMPDL3AQ92484 453 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 C19orf60Q96EN9 201 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 WDR34Q96EX3 536 aa8.34□□□□□ -1.07
TRAF3-209ENST00000560463 TUBB6Q9BUF5 446 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms