RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 BTN3A3O00478 584 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 CASC3O15234 703 aaKnown RBP13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 POLR2CP19387 275 aaPredicted RBP13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 CDH3P22223 829 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 CRABP2P29373 138 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 ARL4DP49703 201 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 MC2RQ01718 297 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 GRB7Q14451 532 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 USP10Q14694 798 aaKnown RBP13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 ZKSCAN8Q15776 578 aaPredicted RBP13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 CYP2A13Q16696 494 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 LGSNQ5TDP6 509 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 SPESP1Q6UW49 350 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 UBE2R2Q712K3 238 aaPredicted RBP13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 D2HGDHQ8N465 521 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 BMPERQ8N8U9 685 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 RCBTB1Q8NDN9 531 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 OR8K5Q8NH50 307 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 EEF1AKMT1Q8WVE0 214 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 LINGO1Q96FE5 620 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 PRR11Q96HE9 360 aaPredicted RBP13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 CCDC138Q96M89 665 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 OLFM1Q99784 485 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 DHRS4Q9BTZ2 278 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 ASCL3Q9NQ33 180 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 KLHL3Q9UH77 587 aa13.53□□□□□ -0.24
PKNOX1-209ENST00000560448 EXOC1LA0A1B0GW35 172 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 BRINP1O60477 761 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 TNFSF15O95150 251 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 TSPAN12O95859 305 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 INHBAP08476 426 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 TPBGLP0DKB5 382 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 CCND1P24385 295 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 TAS2R39P59534 338 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 RAB10P61026 200 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 ATP6V0D1P61421 351 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 GNGT1P63211 74 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 GUCY1A3Q02108 690 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 SNAP47Q5SQN1 464 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 DCAF12Q5T6F0 453 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 CEACAM20Q6UY09 585 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 FAM92BQ6ZTR7 304 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 ADAMTSL2Q86TH1 951 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 SNIP1Q8TAD8 396 aaKnown RBP13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 SLC44A1Q8WWI5 657 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 ATL1Q8WXF7 558 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 SMPDL3AQ92484 453 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 FGF11Q92914 225 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 OR2A14Q96R47 310 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 MAP3K3Q99759 626 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 CNOT10Q9H9A5 744 aaKnown RBP13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 FANCEQ9HB96 536 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 SIDT1Q9NXL6 827 aaKnown RBP13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 UTP6Q9NYH9 597 aaKnown RBP13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 PISDQ9UG56 409 aa13.52□□□□□ -0.25
PKNOX1-209ENST00000560448 A0A0J9YY10 115 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 EFCAB7A8K855 629 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 A8MU76 341 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 KRT38O76015 456 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 CCNDBP1O95273 360 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 CAPNS1P04632 268 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 F7P08709 466 aaPredicted RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 FGF3P11487 239 aaPredicted RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 MPSTP25325 297 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 BDKRB1P46663 353 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 CDKL1Q00532 357 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 DMTNQ08495 405 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 TTC19Q6DKK2 380 aaPredicted RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 PIWIL4Q7Z3Z4 852 aaKnown RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 FAM129CQ86XR2 697 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 JPH3Q8WXH2 748 aaPredicted RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 ZUFSPQ96AP4 578 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 TCTN2Q96GX1 697 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 DERL2Q9GZP9 239 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 PCBD2Q9H0N5 130 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 XKR8Q9H6D3 395 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 PDE7BQ9NP56 450 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 SLC39A1Q9NY26 324 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 ANKMY1Q9P2S6 941 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 MTO1Q9Y2Z2 717 aaKnown RBP13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 KLK4Q9Y5K2 254 aa13.51□□□□□ -0.25
PKNOX1-209ENST00000560448 IGHV5-51A0A0C4DH38 117 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 A0A1W2PNU3 283 aaPredicted RBP13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 ISM1B1AKI9 464 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 C1QTNF9BB2RNN3 333 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 TARM1B6A8C7 271 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 POLR1CO15160 346 aaPredicted RBP13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 WISP3O95389 354 aaPredicted RBP13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 C1QTNF9P0C862 333 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 UGT2B7P16662 529 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 SAT1P21673 171 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 HRH2P25021 359 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 ABCG1P45844 678 aa13.5□□□□□ -0.25
PKNOX1-209ENST00000560448 PNLIPRP1P54315 467 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms