RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 KLHL25Q9H0H3 589 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 PCBD2Q9H0N5 130 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TSPYL1Q9H0U9 437 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 ACTR5Q9H9F9 607 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 TXLNGQ9NUQ3 528 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 SPHK1Q9NYA1 384 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 SPATA7Q9P0W8 599 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TSR3Q9UJK0 312 aaKnown RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 CDC23Q9UJX2 597 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CROTQ9UKG9 612 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CORO1CQ9ULV4 474 aaPredicted RBP4.22□□□□□ -1.73
SNX1-205ENST00000559339 SRPK3Q9UPE1 567 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 PLCL2Q9UPR0 1127 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CHMP2BQ9UQN3 213 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CDYLQ9Y232 598 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 PADI2Q9Y2J8 665 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 VWA7Q9Y334 891 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 SNX24Q9Y343 169 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 DHRS7Q9Y394 339 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 TEX264Q9Y6I9 313 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 MYLKQ15746 1914 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 ZFYVE26Q68DK2 2539 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CHD6Q8TD26 2715 aa4.22□□□□□ -1.73
SNX1-205ENST00000559339 CACNA1GO43497 2377 aa4.21□□□□□ -1.73
SNX1-205ENST00000559339 PTPRQQ9UMZ3 2332 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 LOC400499M0QZD8 3231 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 LOC101059948A0A1B0GTJ6 334 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MYO1CO00159 1063 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 EIF3HO15372 352 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNX1-205ENST00000559339 SLC16A5O15375 505 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ZNF749O43361 778 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 RAD51CO43502 376 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 PSIP1O75475 530 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 BANF1O75531 89 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 TIAF1O95411 115 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 SLC16A8O95907 504 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 AHSGP02765 367 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 C8GP07360 202 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 GSTA2P09210 222 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MPC1LP0DKB6 136 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 PIM1P11309 404 aaPredicted RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 PVRP15151 417 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ITGAXP20702 1163 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MAGP20916 626 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 SAT1P21673 171 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ALAS2P22557 587 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 CCND1P24385 295 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 HRH2P25021 359 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MCM3P25205 808 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 PTPN4P29074 926 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 OAS2P29728 719 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 RPA3P35244 121 aaPredicted RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 GRK3P35626 688 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 BDKRB1P46663 353 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 RPL21P46778 160 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 PNLIPRP1P54315 467 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ARSFP54793 590 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 PLTPP55058 493 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 CYP4F2P78329 520 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ABATP80404 500 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 DCDP81605 110 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 C2orf54Q08AI8 447 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MGAT5Q09328 741 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 C19orf57Q0VDD7 668 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 CDC20Q12834 499 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 SP140Q13342 867 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 DNASE1L3Q13609 305 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ERV3-1Q14264 604 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 GBX1Q14549 363 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 GRM7Q14831 915 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 CYP2A13Q16696 494 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 FAM214AQ32MH5 1076 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ACSBG2Q5FVE4 666 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ZNF789Q5FWF6 425 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 TEDDM1Q5T9Z0 273 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 YOD1Q5VVQ6 348 aaPredicted RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 KIAA1614Q5VZ46 1190 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 STEAP4Q687X5 459 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 FAM45BPQ6NSW5 357 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ZNF549Q6P9A3 640 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 C3orf62Q6ZUJ4 267 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 UBE2R2Q712K3 238 aaPredicted RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 TIPARPQ7Z3E1 657 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 ADCK2Q7Z695 626 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 STRA8Q7Z7C7 330 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 SYVN1Q86TM6 617 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 TRIM73Q86UV7 250 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 TAX1BP1Q86VP1 789 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 SLC26A11Q86WA9 606 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 ANKMY2Q8IV38 441 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 MCATQ8IVS2 390 aaKnown RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 CPNE9Q8IYJ1 553 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 AGGF1Q8N302 714 aaeCLIP4.21□□□□□ -1.74
SNX1-205ENST00000559339 ZNF655Q8N720 491 aaPredicted RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 LMNTD1Q8N9Z9 388 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 LINC01555Q8NAE3 123 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 FBXO15Q8NCQ5 510 aaPredicted RBP4.21□□□□□ -1.74
SNX1-205ENST00000559339 OR2L3Q8NG85 312 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 OR1L3Q8NH93 324 aa4.21□□□□□ -1.74
SNX1-205ENST00000559339 KIF18AQ8NI77 898 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms