RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NR6A1Q15406 480 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 VPS26BQ4G0F5 336 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 AGTRAPQ6RW13 159 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 TSSK4Q6SA08 328 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CFAP206Q8IYR0 622 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 OXR1Q8N573 874 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 FAM160A2Q8N612 972 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 FNDC5Q8NAU1 212 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 OR56A3Q8NH54 315 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 HM13Q8TCT9 377 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CCDC138Q96M89 665 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 C1QTNF2Q9BXJ5 285 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ACPTQ9BZG2 426 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ACTR8Q9H981 624 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 PFDN4Q9NQP4 134 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ITM2CQ9NQX7 267 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ZIM2Q9NZV7 527 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 USP36Q9P275 1121 aaKnown RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 STX18Q9P2W9 335 aaKnown RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 SLC23A2Q9UGH3 650 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 PRKAB1Q9Y478 270 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3DA0A087WVF3 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3IA0A087WXS9 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3EA0A087X179 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3KA0A087X1G2 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3FA6NER0 549 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3LB9A6J9 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 K7ESF4 209 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 RSL1D1O76021 490 aaKnown RBP12.57□□□□□ -0.4
SMAD3-207ENST00000558763 LMNAP02545 664 aaKnown RBP12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3HP0C7X1 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 MS4A2Q01362 244 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 SFSWAPQ12872 951 aaKnown RBP12.57□□□□□ -0.4
SMAD3-207ENST00000558763 E2F2Q14209 437 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 KIAA0040Q15053 153 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 CPSF6Q16630 551 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMAD3-207ENST00000558763 AP5B1Q2VPB7 878 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 PLA2G4EQ3MJ16 856 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 COQ5Q5HYK3 327 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3GQ6DHY5 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3CQ6IPX1 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 RGL4Q8IZJ4 473 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TBC1D3Q8IZP1 549 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-207ENST00000558763 FRMD1Q8N878 549 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TMEM105Q8N8V8 129 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 TSPEARQ8WU66 669 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 NRG4Q8WWG1 115 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 SLC39A3Q9BRY0 314 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 ZDHHC5Q9C0B5 715 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 BTBD1Q9H0C5 482 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 DPEP2Q9H4A9 486 aa12.57□□□□□ -0.4
SMAD3-207ENST00000558763 ZNF490Q9ULM2 529 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-207ENST00000558763 MGAT4DA6NG13 374 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 NPIPB8E9PQR5 432 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 CFLARO15519 480 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 MAP3K7O43318 606 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 ULK1O75385 1050 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 PDYNP01213 254 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 FUCA1P04066 466 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 G6PDP11413 515 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 MAT2AP31153 395 aaKnown RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 MAPK9P45984 424 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 PPP2CBP62714 309 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 PPP2CAP67775 309 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 INPP5AQ14642 412 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 THOC6Q86W42 341 aaKnown RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 LRRC56Q8IYG6 542 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 CAMKK1Q8N5S9 505 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 RNF148Q8N7C7 305 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 NUDT8Q8WV74 236 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 KLK6Q92876 244 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 SPDL1Q96EA4 605 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 TM7SF3Q9NS93 570 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 TMEM45AQ9NWC5 275 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 ASIC5Q9NY37 505 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 TMEM181Q9P2C4 612 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 CD300AQ9UGN4 299 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 ZNHIT2Q9UHR6 403 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 INVSQ9Y283 1065 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 POLR3HQ9Y535 204 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 A0A1W2PP18 115 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 A0A1W2PQU0 124 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 ACOT8O14734 319 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 RNGTTO60942 597 aaKnown RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 MAP4P27816 1152 aaKnown RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 MSX2P35548 267 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 DMWDQ09019 674 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 NAE1Q13564 534 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 GTF2H3Q13889 308 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 TLR1Q15399 786 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 ZRSR2Q15696 482 aaKnown RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 SMU1Q2TAY7 513 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 MMEL1Q495T6 779 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 IL23RQ5VWK5 629 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 DOK6Q6PKX4 331 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 CYP20A1Q6UW02 462 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms