RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SHBQ15464 509 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 C6orf132Q5T0Z8 1188 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 THEMIS2Q5TEJ8 643 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 OGFOD3Q6PK18 319 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 GPRIN3Q6ZVF9 776 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 PPFIBP2Q8ND30 876 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 PIWIL2Q8TC59 973 aaKnown RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 SETD7Q8WTS6 366 aaKnown RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 PATE1Q8WXA2 126 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 SH3KBP1Q96B97 665 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 MAGEB10Q96LZ2 347 aaPredicted RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 HAUS8Q9BT25 410 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 DUSP23Q9BVJ7 150 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 SGPP1Q9BX95 441 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 IRF2BPLQ9H1B7 796 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 GAREM1Q9H706 876 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 NOL11Q9H8H0 719 aaKnown RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 ZNF395Q9H8N7 513 aaPredicted RBP16.34■□□□□ 0.21
SNX1-203ENST00000558040 ZBTB26Q9HCK0 441 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 MID1IP1Q9NPA3 183 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 GPRC5BQ9NZH0 403 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 OR6C2Q9NZP2 312 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 ICKQ9UPZ9 632 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 DYRK1BQ9Y463 629 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 KCNE2Q9Y6J6 123 aa16.34■□□□□ 0.21
SNX1-203ENST00000558040 FAM221BA6H8Z2 402 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 PATE3B3GLJ2 98 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 SLCO1B7G3V0H7 640 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 CLGNO14967 610 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 CRCPO75575 148 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 ESRRBO95718 433 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 FAM107AO95990 144 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 MPSTP25325 297 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 FASLGP48023 281 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 BNIP3Q12983 259 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 GPR18Q14330 331 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 ZXDCQ2QGD7 858 aaPredicted RBP16.33■□□□□ 0.2
SNX1-203ENST00000558040 SH2D4BQ5SQS7 431 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 PRAMEF13Q5VWM6 474 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 LCTLQ6UWM7 567 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 AMIGO1Q86WK6 493 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 WDR75Q8IWA0 830 aaKnown RBP16.33■□□□□ 0.2
SNX1-203ENST00000558040 LRRC56Q8IYG6 542 aaPredicted RBP16.33■□□□□ 0.2
SNX1-203ENST00000558040 ZNF781Q8N8C0 355 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 AGAP11Q8TF27 550 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 FAR2Q96K12 515 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 TRIM55Q9BYV6 548 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.33■□□□□ 0.2
SNX1-203ENST00000558040 SHCBP1LQ9BZQ2 653 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 SRMSQ9H3Y6 488 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 FSCN3Q9NQT6 498 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 INTS7Q9NVH2 962 aaKnown RBP16.33■□□□□ 0.2
SNX1-203ENST00000558040 NLGN3Q9NZ94 848 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 GMEB2Q9UKD1 530 aa16.33■□□□□ 0.2
SNX1-203ENST00000558040 TDRD6O60522 2096 aaKnown RBP16.33■□□□□ 0.2
SNX1-203ENST00000558040 PRAMEF33A0A0G2JMD5 474 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 UBFD1O14562 309 aaKnown RBP16.32■□□□□ 0.2
SNX1-203ENST00000558040 OR7A17O14581 309 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 NOBOXO60393 691 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 EBLN1P0CF75 366 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 GNAZP19086 355 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 ATXN3P54252 364 aaPredicted RBP16.32■□□□□ 0.2
SNX1-203ENST00000558040 MAZP56270 477 aaKnown RBP16.32■□□□□ 0.2
SNX1-203ENST00000558040 SH3BP2P78314 561 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 FASTKQ14296 549 aaKnown RBP16.32■□□□□ 0.2
SNX1-203ENST00000558040 C14orf28Q4W4Y0 310 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 SUSD1Q6UWL2 747 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 TMEM26Q6ZUK4 368 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 MILR1Q7Z6M3 343 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 C17orf82Q86X59 251 aaPredicted RBP16.32■□□□□ 0.2
SNX1-203ENST00000558040 SLC25A45Q8N413 288 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 ARL14Q8N4G2 192 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 CHCHD4Q8N4Q1 142 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 ARL10Q8N8L6 244 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 CCT8L2Q96SF2 557 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 SIKE1Q9BRV8 207 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 NTMT1Q9BV86 223 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 XKR8Q9H6D3 395 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 ACTR8Q9H981 624 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 UCK1Q9HA47 277 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 ABCF3Q9NUQ8 709 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 VTI1BQ9UEU0 232 aa16.32■□□□□ 0.2
SNX1-203ENST00000558040 TMEM131Q92545 1883 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 HGSO14964 777 aaPredicted RBP16.31■□□□□ 0.2
SNX1-203ENST00000558040 UGDHO60701 494 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 ENO1P06733 434 aaKnown RBP16.31■□□□□ 0.2
SNX1-203ENST00000558040 RETP07949 1114 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 FGF4P08620 206 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 KITP10721 976 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 TRAF3Q13114 568 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 PLA2G2CQ5R387 149 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.31■□□□□ 0.2
SNX1-203ENST00000558040 ATG14Q6ZNE5 492 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
SNX1-203ENST00000558040 SYVN1Q86TM6 617 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 CLYBLQ8N0X4 340 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 C2orf73Q8N5S3 287 aaPredicted RBP16.31■□□□□ 0.2
SNX1-203ENST00000558040 GPR156Q8NFN8 814 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 OR4E2Q8NGC2 313 aa16.31■□□□□ 0.2
SNX1-203ENST00000558040 OR52B6Q8NGF0 335 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms