RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 KIAA1614Q5VZ46 1190 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 KIAA1958Q8N8K9 716 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 SLC38A4Q969I6 547 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 RHNO1Q9BSD3 238 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 NTMT1Q9BV86 223 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 APOL5Q9BWW9 433 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 ITPAQ9BY32 194 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 CIPCQ9C0C6 399 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 CLPBQ9H078 707 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 SERHLQ9NQF3 203 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 KRT84Q9NSB2 600 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 PDP1Q9P0J1 537 aaPredicted RBP11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 RBMX2Q9Y388 322 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 UGT2A1Q9Y4X1 527 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 TSPAN3O60637 253 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 FABP3P05413 133 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF7P17097 686 aaPredicted RBP11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 KRT20P35900 424 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 UGT2B10P36537 528 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 PPP3CCP48454 512 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 KCNQ1P51787 676 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 CDH4P55283 916 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 CLDN8P56748 225 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 PHC1P78364 1004 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 FPGSQ05932 587 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 CCL14Q16627 93 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 PROX2Q3B8N5 592 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 ATAD3BQ5T9A4 648 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 UBE2UQ5VVX9 321 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 CERS6Q6ZMG9 384 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 CCDC80Q76M96 950 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 SERINC5Q86VE9 423 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 HORMAD1Q86X24 394 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 FAM9CQ8IZT9 166 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 TTC9BQ8N6N2 239 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 ATAD1Q8NBU5 361 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 FCGR1BQ92637 280 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 HTRA1Q92743 480 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 B3GALT6Q96L58 329 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 INPP5KQ9BT40 448 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 SLC29A3Q9BZD2 475 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 TNKS2Q9H2K2 1166 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 RETREG1Q9H6L5 497 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 POU2F3Q9UKI9 436 aa11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 ZFP37Q9Y6Q3 630 aaPredicted RBP11.53□□□□□ -0.56
VIPAS39-211ENST00000557658 EVPLLA8MZ36 301 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 LOC730098B7Z3J9 87 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 SNPHO15079 494 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 GPR39O43194 453 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 NUAK1O60285 661 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 ACSL4O60488 711 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 KRT6AP02538 564 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 KRT6BP04259 564 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 LCKP06239 509 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 EPB42P16452 691 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 ITGB6P18564 788 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 DGKAP23743 735 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 SLC6A4P31645 630 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 TGFBR1P36897 503 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 KRT6CP48668 564 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 CSNK2BP67870 215 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 TTLL9Q3SXZ7 439 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 AHSA2Q719I0 299 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 ANKRD46Q86W74 232 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 POC5Q8NA72 575 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 ATG16L2Q8NAA4 619 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 UBTD2Q8WUN7 234 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 USP7Q93009 1102 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 CCSER2Q9H7U1 834 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 RASSF1Q9NS23 344 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 VPS51Q9UID3 782 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 SLCO3A1Q9UIG8 710 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 RPS6KA6Q9UK32 745 aa11.52□□□□□ -0.56
VIPAS39-211ENST00000557658 MYADML2A6NDP7 307 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 AGAP5A6NIR3 686 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 AIREO43918 545 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 TLR5O60602 858 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 ARHGEF15O94989 841 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 PARNO95453 639 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 DLGAP3O95886 979 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 F11P03951 625 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 PRPS2P11908 318 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 BMP1P13497 986 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF24P17028 368 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 HOXB9P17482 250 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 HOXA9P31269 272 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 THPOP40225 353 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 PTPRRQ15256 657 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 NDUFA5Q16718 116 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 COLEC12Q5KU26 742 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 METTL2BQ6P1Q9 378 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 DOK6Q6PKX4 331 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 IL17CQ9P0M4 197 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 SAMHD1Q9Y3Z3 626 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-211ENST00000557658 A0A0U1RQS6 177 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 METTL15A6NJ78 407 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 hCG_2039718K7EN88 272 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 CBX4O00257 560 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms