RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CCDC80Q76M96 950 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TMPRSS12Q86WS5 348 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SIAH3Q8IW03 269 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 THNSL1Q8IYQ7 743 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 METTL27Q8N6F8 245 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 NUDCD2Q8WVJ2 157 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 EXT2Q93063 718 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ZKSCAN4Q969J2 545 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 EXOC4Q96A65 974 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SNRNP40Q96DI7 357 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ADGRG7Q96K78 797 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 IL17FQ96PD4 163 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SH3GL1Q99961 368 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CRACR2AQ9BSW2 395 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TUBB2BQ9BVA1 445 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 DPAGT1Q9H3H5 408 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ST6GALNAC4Q9H4F1 302 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TUBGCP4Q9UGJ1 667 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 POU2F3Q9UKI9 436 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 LIPT1Q9Y234 373 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TRAV24A0A0B4J272 114 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 EDDM13A0A1B0GTR0 161 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 LINC01553A4QN01 128 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 HTR3EA5X5Y0 456 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TRIM77I1YAP6 450 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ZBTB14O43829 449 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 XPNPEP2O43895 674 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CTSVO60911 334 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 PSMD10O75832 226 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 KIAA0754O94854 1291 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 IGHV4-38-2P0DP08 117 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TROVE2P10155 538 aaKnown RBP eCLIP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 MYOD1P15172 320 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 GJA1P17302 382 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 HAAOP46952 286 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 GLIPR1P48060 266 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 HTR6P50406 440 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 HNRNPKP61978 463 aaKnown RBP eCLIP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CCNA1P78396 465 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 RBPJQ06330 500 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SMC1AQ14683 1233 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CTU2Q2VPK5 515 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 MDH1BQ5I0G3 518 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 BEND6Q5SZJ8 279 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF324BQ6AW86 544 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SPATA24Q86W54 205 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 VSIG1Q86XK7 387 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 WDR49Q8IV35 697 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF619Q8N2I2 560 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 BMPERQ8N8U9 685 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 OR52K2Q8NGK3 314 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 THOC3Q96J01 351 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 NCOR1P1Q9H4R4 102 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 Q9H8V8 135 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ACKR4Q9NPB9 350 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 AATFQ9NY61 560 aaKnown RBP eCLIP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 COQ3Q9NZJ6 369 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 KIAA1257Q9ULG3 409 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CHTOPQ9Y3Y2 248 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 NPC1L1Q9UHC9 1359 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SLC7A4O43246 635 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 TBCAO75347 108 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 H1F0P07305 194 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 FAM157CP0CG43 387 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CDH1P12830 882 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 POLR2CP19387 275 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 EFNA1P20827 205 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 MUTP22033 750 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PCGF2P35227 344 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PTGER4P35408 488 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ASMTP46597 345 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CDX1P47902 265 aaPredicted RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF75DP51815 510 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 MFAP3P55082 362 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 POLR2LP62875 67 aaKnown RBP1.6□□□□□ -2.15
HIF1A-212ENST00000557538 DLK1P80370 383 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM266Q2M3C6 531 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF789Q5FWF6 425 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CYP4A22Q5TCH4 519 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PM20D1Q6GTS8 502 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 FIGLAQ6QHK4 219 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 UNQ6126/PRO20091Q6UXV3 157 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF600Q6ZNG1 722 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 C18orf65Q6ZTR6 163 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ANKRD33Q7Z3H0 272 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SMIM29Q86T20 159 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 IQCHQ86VS3 1027 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 SFR1Q86XK3 245 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 PLD3Q8IV08 490 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF595Q8IYB9 648 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 TBC1D21Q8IYX1 336 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 IQUBQ8NA54 791 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 KLHDC9Q8NEP7 349 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 FGFBP3Q8TAT2 258 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 FER1L6-AS2Q96M78 137 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 C1QTNF4Q9BXJ3 329 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 LRRCC1Q9C099 1032 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 NT5C3AQ9H0P0 336 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 HIPK2Q9H2X6 1198 aa1.6□□□□□ -2.15
HIF1A-212ENST00000557538 CDH20Q9HBT6 801 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms