RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 ERVK-11Q9UQG0 969 aa15.88■□□□□ 0.13
SHMT2-231ENST00000557433 TSC22D4Q9Y3Q8 395 aa15.88■□□□□ 0.13
SHMT2-231ENST00000557433 PCDHGC4Q9Y5F7 938 aa15.88■□□□□ 0.13
SHMT2-231ENST00000557433 U3KQV3 271 aa15.88■□□□□ 0.13
SHMT2-231ENST00000557433 TTC3P53804 2025 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 E9PQ18 207 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 FFAR3O14843 346 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 GPR42O15529 346 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 MITFO75030 526 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-231ENST00000557433 CLDN9O95484 217 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 SEMG1P04279 462 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 SLC6A4P31645 630 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 ALDH7A1P49419 539 aaKnown RBP15.87■□□□□ 0.13
SHMT2-231ENST00000557433 HMGCS1Q01581 520 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 SIM2Q14190 667 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-231ENST00000557433 MRPL58Q14197 206 aaKnown RBP15.87■□□□□ 0.13
SHMT2-231ENST00000557433 GBX1Q14549 363 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 CCL14Q16627 93 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 PHKG1Q16816 387 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 ZNF404Q494X3 552 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 GTDC1Q4AE62 458 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 CARD16Q5EG05 197 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 MLIPQ5VWP3 458 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 CCDC81Q6ZN84 652 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 PAGE2Q7Z2X7 111 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 HORMAD1Q86X24 394 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 BEND7Q8N7W2 519 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-231ENST00000557433 CHAC2Q8WUX2 184 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 NUDT8Q8WV74 236 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 MAGEB10Q96LZ2 347 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-231ENST00000557433 CTRCQ99895 268 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 SPATA9Q9BWV2 254 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 CWH43Q9H720 699 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 ZNF408Q9H9D4 720 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 BPIFA1Q9NP55 256 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 EXD2Q9NVH0 621 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 VNN3Q9NY84 501 aa15.87■□□□□ 0.13
SHMT2-231ENST00000557433 EVLQ9UI08 416 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-231ENST00000557433 SERTM1A2A2V5 107 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 IQCF5A8MTL0 148 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 MYO1DO94832 1006 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 FADS2O95864 444 aaKnown RBP15.86■□□□□ 0.13
SHMT2-231ENST00000557433 CBSLP0DN79 551 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 CD36P16671 472 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 PTPN6P29350 595 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 CBSP35520 551 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 TGFBR2P37173 567 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 PCYT1AP49585 367 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 NCS1P62166 190 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ZNF45Q02386 682 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 TEKQ02763 1124 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 FAM26DQ5JW98 314 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 FAHD1Q6P587 224 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 GALNT5Q7Z7M9 940 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 CPA6Q8N4T0 437 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ATAD1Q8NBU5 361 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 C2orf15Q8WU43 125 aaKnown RBP15.86■□□□□ 0.13
SHMT2-231ENST00000557433 SOCS4Q8WXH5 440 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 EXOC2Q96KP1 924 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 HHIPQ96QV1 700 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 GPR63Q9BZJ6 419 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 KRT84Q9NSB2 600 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 PLCXD1Q9NUJ7 323 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 KIF17Q9P2E2 1029 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ZNF229Q9UJW7 825 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ATP11BQ9Y2G3 1177 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ACTL7AQ9Y615 435 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 BPTFQ12830 3046 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 A0A1B0GVM2 712 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 LOC730098B7Z3J9 87 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 FZD6O60353 706 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 PRMT3O60678 531 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 STK16O75716 305 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 GUCA1CO95843 209 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 PTTG1O95997 202 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 GSTT2P0CG29 244 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 GSTT2BP0CG30 244 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ITGALP20701 1170 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 FUT4P22083 530 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ATP5C1P36542 298 aaKnown RBP15.86■□□□□ 0.13
SHMT2-231ENST00000557433 GSSP48637 474 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 KCNQ1P51787 676 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ELP6Q0PNE2 266 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 PPP1R8Q12972 351 aaKnown RBP15.86■□□□□ 0.13
SHMT2-231ENST00000557433 DNASE1L3Q13609 305 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 GTF2H3Q13889 308 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 TBCEQ15813 527 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-231ENST00000557433 TMEM236Q5W0B7 351 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 CXCL17Q6UXB2 119 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 MACC1Q6ZN28 852 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 USP43Q70EL4 1123 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 TCAIMQ8N3R3 496 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 ZBTB2Q8N680 514 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 AMER2Q8N7J2 671 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 NELL1Q92832 810 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 PLD4Q96BZ4 506 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 CMTM7Q96FZ5 175 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 PTPN18Q99952 460 aa15.86■□□□□ 0.13
SHMT2-231ENST00000557433 HERC2P3Q9BVR0 1158 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms