RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 KRT12Q99456 494 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 PITPNM3Q9BZ71 974 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 IRAK4Q9NWZ3 460 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 FAM120CQ9NX05 1096 aaKnown RBP3.53□□□□□ -1.84
VRK1-207ENST00000557352 RHCGQ9UBD6 479 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 ZDHHC2Q9UIJ5 367 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 WDR37Q9Y2I8 494 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 MOB4Q9Y3A3 225 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.53□□□□□ -1.84
VRK1-207ENST00000557352 STRCP1A6NGW2 1772 aa3.53□□□□□ -1.84
VRK1-207ENST00000557352 NKTRP30414 1462 aaKnown RBP3.53□□□□□ -1.84
VRK1-207ENST00000557352 MARF1Q9Y4F3 1742 aaKnown RBP3.53□□□□□ -1.85
VRK1-207ENST00000557352 KIF1AQ12756 1690 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 NSD2O96028 1365 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 PARD3Q8TEW0 1356 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 PHRF1Q9P1Y6 1649 aaKnown RBP3.52□□□□□ -1.85
VRK1-207ENST00000557352 VIRMAQ69YN4 1812 aaKnown RBP3.52□□□□□ -1.85
VRK1-207ENST00000557352 KPNA7A9QM74 516 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 MYO1GB0I1T2 1018 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 GAPDHSO14556 408 aaPredicted RBP3.52□□□□□ -1.85
VRK1-207ENST00000557352 NXPH2O95156 264 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 LAMP2P13473 410 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 PRLRP16471 622 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 CCR10P46092 362 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 GSDMDP57764 484 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 CX3CL1P78423 397 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 DMPKQ09013 629 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 KLHL26Q53HC5 615 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 TAF1BQ53T94 588 aaPredicted RBP3.52□□□□□ -1.85
VRK1-207ENST00000557352 ZNF343Q6P1L6 599 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 TMEM154Q6P9G4 183 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 PTAR1Q7Z6K3 402 aaPredicted RBP3.52□□□□□ -1.85
VRK1-207ENST00000557352 MCEMP1Q8IX19 187 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 PPFIBP2Q8ND30 876 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 AZIN2Q96A70 460 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 PGAM5Q96HS1 289 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 PPM1MQ96MI6 270 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 SRSF8Q9BRL6 282 aaKnown RBP3.52□□□□□ -1.85
VRK1-207ENST00000557352 GPATCH1Q9BRR8 931 aaKnown RBP3.52□□□□□ -1.85
VRK1-207ENST00000557352 C16orf70Q9BSU1 422 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 LRRC61Q9BV99 259 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 UPF3AQ9H1J1 476 aaKnown RBP3.52□□□□□ -1.85
VRK1-207ENST00000557352 PRR34Q9NV39 138 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 TAS2R14Q9NYV8 317 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 SHPRHQ149N8 1683 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 NCOA3Q9Y6Q9 1424 aa3.52□□□□□ -1.85
VRK1-207ENST00000557352 EVC2Q86UK5 1308 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 DLG5Q8TDM6 1919 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 TBX18O95935 607 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 DDX10Q13206 875 aaKnown RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 RAPSNQ13702 412 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 KCNC3Q14003 757 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 RALBP1Q15311 655 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 E2F5Q15329 346 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 FAM98BQ52LJ0 330 aaKnown RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 WLSQ5T9L3 541 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 FIP1L1Q6UN15 594 aaKnown RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 Q6ZRP5 223 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 IKBIPQ70UQ0 350 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 INTS8Q75QN2 995 aaKnown RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 HOGA1Q86XE5 327 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 PRSS33Q8NF86 280 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 GTF3AQ92664 365 aaKnown RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 OR6C1Q96RD1 312 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 FNBP1Q96RU3 617 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 PPIL3Q9H2H8 161 aaKnown RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 ZNF701Q9NV72 531 aaPredicted RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 ORC3Q9UBD5 711 aaPredicted RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 EPHA6Q9UF33 1036 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.51□□□□□ -1.85
VRK1-207ENST00000557352 EXO1Q9UQ84 846 aaKnown RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 ANKARQ7Z5J8 1434 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 BRD4O60885 1362 aaPredicted RBP3.51□□□□□ -1.85
VRK1-207ENST00000557352 METP08581 1390 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 ANKRD36BQ8N2N9 1353 aa3.51□□□□□ -1.85
VRK1-207ENST00000557352 CD163L1Q9NR16 1453 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 ZNF195O14628 629 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 SSX4O60224 188 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 DFFBO76075 338 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 CHMP24386 653 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 CDH8P55286 799 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 ELAVL2Q12926 359 aaKnown RBP3.5□□□□□ -1.85
VRK1-207ENST00000557352 CRYMQ14894 314 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 SNX30Q5VWJ9 437 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 GPRIN3Q6ZVF9 776 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 CHST9Q7L1S5 443 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 FAM114A1Q8IWE2 563 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 Q8N377 158 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 WDTC1Q8N5D0 677 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 TRIML1Q8N9V2 468 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 OR13J1Q8NGT2 312 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 USP28Q96RU2 1077 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 DGCR6LQ9BY27 220 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 ITPAQ9BY32 194 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 WWTR1Q9GZV5 400 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 CHMP1AQ9HD42 196 aaPredicted RBP3.5□□□□□ -1.85
VRK1-207ENST00000557352 MTUS1Q9ULD2 1270 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 TP53TG3Q9ULZ0 132 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 ANGPTL3Q9Y5C1 460 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms