RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZNF404Q494X3 552 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 RD3Q7Z3Z2 195 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 IQCF1Q8N6M8 205 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 FAM86B1Q8N7N1 296 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PROKR2Q8NFJ6 384 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 STK35Q8TDR2 534 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 TKTL2Q9H0I9 626 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 GMDSO60547 372 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CLN5O75503 358 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 C14orf28Q4W4Y0 310 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 RDH10Q8IZV5 341 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 SH2B3Q9UQQ2 575 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 PREX2Q70Z35 1606 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 AGPSO00116 658 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 GADD45GO95257 159 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ITGB1P05556 798 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CERS1P27544 350 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 THBS3P49746 956 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CASP9P55211 416 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ANTXR2P58335 489 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ARSHQ5FYA8 562 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 STYK1Q6J9G0 422 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 FOXR2Q6PJQ5 311 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ASB9Q96DX5 294 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 DMRTB1Q96MA1 342 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 NLGN3Q9NZ94 848 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CMAHPQ9Y471 501 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF670-ZNF695F2Z2N8 137 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 LATO43561 262 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 LINC00032P0C843 101 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ALDH3B1P43353 468 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CRADDP78560 199 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 MEDAGQ5VYS4 303 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 RHBGQ9H310 441 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 C11orf16Q9NQ32 467 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 RIC1Q4ADV7 1423 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 TBC1D3BA6NDS4 549 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 DIRAS3O95661 229 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ALPPP05187 535 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 HCKP08631 526 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 TARDBPQ13148 414 aaKnown RBP eCLIP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 PTPRRQ15256 657 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 NAPRTQ6XQN6 538 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 C3orf49Q96BT1 292 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ASAH2Q9NR71 780 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 VWA7Q9Y334 891 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 F5H0A9 414 aaPredicted RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 TPSB2P20231 275 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 BLKP51451 505 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 EIF2B1Q14232 305 aaKnown RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ADGRE1Q14246 886 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 TPSAB1Q15661 275 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 BCL7BQ9BQE9 202 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ICKQ9UPZ9 632 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 NEXMIFQ5QGS0 1516 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ARHGEF17Q96PE2 2063 aaPredicted RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 C13orf42A0A1B0GVH6 325 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 BOLA2-SMG1P6H3BVE0 249 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 EDF1O60869 148 aaKnown RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ATP6AP2O75787 350 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 NDUFB10O96000 172 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 GLRA2P23416 452 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 OAZ1P54368 228 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 EN1Q05925 392 aaPredicted RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CPSF6Q16630 551 aaKnown RBP eCLIP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CYP4V2Q6ZWL3 525 aaPredicted RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 GALNT5Q7Z7M9 940 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 SLC22A15Q8IZD6 547 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CDT1Q9H211 546 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 NUP153P49790 1475 aaKnown RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CD6P30203 668 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 WEE1P30291 646 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CRB2Q5IJ48 1285 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF571Q7Z3V5 609 aaPredicted RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CCDC71LQ8N9Z2 235 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ABCG4Q9H172 646 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ADAM18Q9Y3Q7 739 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM145Q8NBT3 493 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ART4Q93070 314 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 A0A0G2JN53 185 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 PEX14O75381 377 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 MIPP30301 263 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 BMP8BP34820 402 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 SLC1A5Q15758 541 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 UBAP2Q5T6F2 1119 aaKnown RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 MED27Q6P2C8 311 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 BMP8AQ7Z5Y6 402 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 ZDHHC21Q8IVQ6 265 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 EGFL7Q9UHF1 273 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 PCTPQ9UKL6 214 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM14AQ9Y6G1 99 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 U3KQV3 271 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 NPHP4O75161 1426 aaPredicted RBP8.66□□□□□ -1.02
SYNE3-205ENST00000557275 C2orf72A6NCS6 295 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 PSMB4P28070 264 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 HTD2P86397 168 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 XAGE5Q8WWM1 108 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 SLC5A5Q92911 643 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 CDCA5Q96FF9 252 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms