RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 DCDP81605 110 aaKnown RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 PLOD1Q02809 727 aaPredicted RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 PTCHD3Q3KNS1 767 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 PRR30Q53SZ7 412 aaPredicted RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 KAZNQ674X7 775 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 HIST2H2BCQ6DN03 193 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 TLDC1Q6P9B6 456 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 FBXO38Q6PIJ6 1188 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 SPESP1Q6UW49 350 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 Q6ZS92 163 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 CDHR3Q6ZTQ4 885 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 DAAM2Q86T65 1068 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 HOOK3Q86VS8 718 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 KLHDC8BQ8IXV7 354 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 ADGRF3Q8IZF5 1079 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 GALNT16Q8N428 558 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 ZADH2Q8N4Q0 377 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 OR52E1Q8NGJ3 308 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 OR2Y1Q8NGV0 311 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 DENND1AQ8TEH3 1009 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 TFGQ92734 400 aaPredicted RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 N4BP2L2Q92802 583 aaPredicted RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 PTERQ96BW5 349 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 C5orf34Q96MH7 638 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 GBP5Q96PP8 586 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 CHP1Q99653 195 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 FICDQ9BVA6 458 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 TMPRSS13Q9BYE2 586 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 ZNF552Q9H707 407 aaPredicted RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 AGPAT4Q9NRZ5 378 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 ABHD10Q9NUJ1 306 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 ACTR10Q9NZ32 417 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 OR6C2Q9NZP2 312 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 POLG2Q9UHN1 485 aa8.36□□□□□ -1.07
VRK1-206ENST00000557222 GPN3Q9UHW5 284 aaPredicted RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 ERRFI1Q9UJM3 462 aaPredicted RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 COPG1Q9Y678 874 aaKnown RBP8.36□□□□□ -1.07
VRK1-206ENST00000557222 SYCE3A1L190 88 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 ANKUB1A6NFN9 424 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 LIN7AO14910 233 aaPredicted RBP8.35□□□□□ -1.07
VRK1-206ENST00000557222 OR2B3O76000 313 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 CLDN1O95832 211 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 TNNT1P13805 278 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 PSMA3P25788 255 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 ACRV1P26436 265 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 RBL1P28749 1068 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 OTX2P32243 289 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 SHMT2P34897 504 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 DCTP40126 519 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 FOLR3P41439 243 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 GABRA4P48169 554 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 PTPRCAPQ14761 206 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 SPRED3Q2MJR0 410 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 ANKRD20A2Q5SQ80 823 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 ANKRD20A1Q5TYW2 823 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 ANKRD20A3Q5VUR7 823 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 MLIPQ5VWP3 458 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 TBC1D21Q8IYX1 336 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 CISD2Q8N5K1 135 aaKnown RBP8.35□□□□□ -1.07
VRK1-206ENST00000557222 LILRA3Q8N6C8 439 aaPredicted RBP8.35□□□□□ -1.07
VRK1-206ENST00000557222 C19orf47Q8N9M1 422 aaKnown RBP8.35□□□□□ -1.07
VRK1-206ENST00000557222 ST6GALNAC3Q8NDV1 305 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 HAUS1Q96CS2 278 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 C19orf60Q96EN9 201 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 GORASP1Q9BQQ3 440 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 CLEC4MQ9H2X3 399 aaPredicted RBP8.35□□□□□ -1.07
VRK1-206ENST00000557222 SPTLC3Q9NUV7 552 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 ASF1BQ9NVP2 202 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 P4HTMQ9NXG6 502 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 NDOR1Q9UHB4 597 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 PTRH2Q9Y3E5 179 aaKnown RBP8.35□□□□□ -1.07
VRK1-206ENST00000557222 POLQO75417 2590 aa8.35□□□□□ -1.07
VRK1-206ENST00000557222 FER1L5A0AVI2 2057 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 MDC1Q14676 2089 aaKnown RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 SVILO95425 2214 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 A0A0J9YY10 115 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 A1L4Q6 167 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 F8W8V4 182 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 H7C0C1 242 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 AGPSO00116 658 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 ZSCAN9O15535 394 aaPredicted RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 LDB2O43679 373 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 KRT86O43790 486 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 MFAP3LO75121 409 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 AP2A1O95782 977 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 CBSLP0DN79 551 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 PIM1P11309 404 aaPredicted RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 UGT2B7P16662 529 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 ACADLP28330 430 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 PDHA2P29803 388 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 PTPN7P35236 360 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 CBSP35520 551 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 NSG1P42857 185 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 ATP5OP48047 213 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 ARSFP54793 590 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 PER3P56645 1201 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 PCDH1Q08174 1060 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 AIMP2Q13155 320 aaKnown RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 ITIH4Q14624 930 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 KIR2DS3Q14952 304 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms