RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 PAPPA-AS1Q5QFB9 102 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 ZNF280DQ6N043 979 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 TSSK4Q6SA08 328 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 ZC3HC1Q86WB0 502 aaKnown RBP5.02□□□□□ -1.61
HIF1A-209ENST00000556827 CCDC13Q8IYE1 715 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 MAML2Q8IZL2 1156 aaPredicted RBP5.02□□□□□ -1.61
HIF1A-209ENST00000556827 PGBD5Q8N414 524 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 BEST2Q8NFU1 509 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 DEPDC1BQ8WUY9 529 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 SMARCD2Q92925 531 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 EXOC4Q96A65 974 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 CSF3RQ99062 836 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 POLR3CQ9BUI4 534 aaPredicted RBP5.02□□□□□ -1.61
HIF1A-209ENST00000556827 KCNN2Q9H2S1 579 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 PDZD7Q9H5P4 517 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 ESRP2Q9H6T0 727 aaKnown RBP5.02□□□□□ -1.61
HIF1A-209ENST00000556827 LMAN1LQ9HAT1 526 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 SCPEP1Q9HB40 452 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 NOX4Q9NPH5 578 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 MKKSQ9NPJ1 570 aaPredicted RBP5.02□□□□□ -1.61
HIF1A-209ENST00000556827 TRPV5Q9NQA5 729 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 ASAH2Q9NR71 780 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 HCFC1R1Q9NWW0 138 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 CACNG4Q9UBN1 327 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 FBXO9Q9UK97 447 aaPredicted RBP5.02□□□□□ -1.61
HIF1A-209ENST00000556827 RCOR1Q9UKL0 485 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 PCDHGB1Q9Y5G3 927 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 PIAS3Q9Y6X2 628 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 KMT2EQ8IZD2 1858 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 KIAA1671Q9BY89 1806 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 ZNF318Q5VUA4 2279 aa5.02□□□□□ -1.61
HIF1A-209ENST00000556827 A0A087WWV3 80 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 SMIM28A0A1B0GU29 152 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 ARHGEF37A1IGU5 675 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 BTBD18B2RXH4 712 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 PTGESO14684 152 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 KRT86O43790 486 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 OR52Z1P0C646 297 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 CEBPBP17676 345 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 CCNE1P24864 410 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 RPA1P27694 616 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 CHATP28329 748 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 HNRNPH1P31943 449 aaKnown RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 CDAP32320 146 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 CCT6AP40227 531 aaKnown RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 ARL1P40616 181 aaPredicted RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 MATR3P43243 847 aaKnown RBP eCLIP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 BRCC3P46736 316 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 GABRB2P47870 512 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 RPS3AP61247 264 aaKnown RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 OSTNP61366 133 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 RPL36AP83881 106 aaKnown RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 ROR1Q01973 937 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 GRSF1Q12849 480 aaKnown RBP eCLIP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 ORC2Q13416 577 aaPredicted RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 DHX34Q14147 1143 aaKnown RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 KRT81Q14533 505 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 LPAL2Q16609 132 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 UPP1Q16831 310 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 FAM78AQ5JUQ0 283 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 GLRA4Q5JXX5 417 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 SLC8B1Q6J4K2 584 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 FAM180BQ6P0A1 224 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 ARMCX5Q6P1M9 558 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 KLHL24Q6TFL4 600 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 LONP2Q86WA8 852 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 CATSPER3Q86XQ3 398 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 MFSD6LQ8IWD5 586 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 SPEM1Q8N4L4 309 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 TEX19Q8NA77 164 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 SCCPDHQ8NBX0 429 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 INTS12Q96CB8 462 aaKnown RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 C7orf26Q96N11 449 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 LRFN5Q96NI6 719 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 GCNAQ96QF7 691 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 C8orf33Q9H7E9 229 aaPredicted RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 PRMT8Q9NR22 394 aaPredicted RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 OLA1Q9NTK5 396 aaKnown RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 ZNF69Q9UC07 566 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 LRWD1Q9UFC0 647 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 HAO1Q9UJM8 370 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 NOL7Q9UMY1 257 aaKnown RBP5.01□□□□□ -1.61
HIF1A-209ENST00000556827 CEPT1Q9Y6K0 416 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 STON1Q9Y6Q2 735 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 MYO7AQ13402 2215 aa5.01□□□□□ -1.61
HIF1A-209ENST00000556827 TMEM202A6NGA9 273 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 EIF3CLB5ME19 914 aaKnown RBP5□□□□□ -1.61
HIF1A-209ENST00000556827 H0YCG3 227 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 I3L4J1 428 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 SLC30A4O14863 429 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 CHADO15335 359 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 MED24O75448 989 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 CLEC3BP05452 202 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 MCF2P10911 925 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 ART1P52961 327 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 OLR1P78380 273 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 TWF1Q12792 350 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 NAE1Q13564 534 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 KYAT1Q16773 422 aa5□□□□□ -1.61
HIF1A-209ENST00000556827 SLC45A4Q5BKX6 768 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms