RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ST6GAL1P15907 406 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 MGAT1P26572 445 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CCNFP41002 786 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 EIF3BP55884 814 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 PPP1R7Q15435 360 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 SF1Q15637 639 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF658BQ4V348 819 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 IZUMO3Q5VZ72 239 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 FAM199XQ6PEV8 388 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 FBXO38Q6PIJ6 1188 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 UNC5DQ6UXZ4 953 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 DCUN1D3Q8IWE4 304 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 PRELID2Q8N945 189 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 CT55Q8WUE5 264 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 RAD51AP1Q96B01 352 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 RNF31Q96EP0 1072 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ABHD17AQ96GS6 310 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TRAPPC9Q96Q05 1148 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 AP1M1Q9BXS5 423 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 NLNQ9BYT8 704 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TREX1Q9NSU2 369 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 TXLNGQ9NUQ3 528 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 GPN3Q9UHW5 284 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 SNX7Q9UNH6 387 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 ICKQ9UPZ9 632 aa7.08□□□□□ -1.28
SCFD1-222ENST00000556768 MRPS18BQ9Y676 258 aaKnown RBP7.08□□□□□ -1.28
SCFD1-222ENST00000556768 PRRC2CQ9Y520 2896 aaKnown RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 MYO18BQ8IUG5 2567 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 A0A0J9YY10 115 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 CTAGE9A4FU28 777 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 IQCF5A8MTL0 148 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF749O43361 778 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 GPC4O75487 556 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 RFPL1O75677 317 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 RAB40ALP0C0E4 278 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 UGT2B7P16662 529 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 CD9P21926 228 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 F8A1P23610 371 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 AOAHP28039 575 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 NMBRP28336 390 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 MSX1P28360 303 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 OAS2P29728 719 aaKnown RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 FMO4P31512 558 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 COILP38432 576 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 ADARP55265 1226 aaKnown RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 DHX34Q14147 1143 aaKnown RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 SLC5A12Q1EHB4 618 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 TTLL9Q3SXZ7 439 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 LACTB2Q53H82 288 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 ZC3H12BQ5HYM0 836 aaKnown RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 PLEKHS1Q5SXH7 462 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 NEPROQ6NW34 567 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 TLDC1Q6P9B6 456 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 LDB1Q86U70 411 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 RASGEF1CQ8N431 466 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 C19orf47Q8N9M1 422 aaKnown RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 TEX19Q8NA77 164 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 GOLM1Q8NBJ4 401 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 CALML6Q8TD86 181 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 MFSD3Q96ES6 412 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 PPM1MQ96MI6 270 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 NDC1Q9BTX1 674 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 DHRS4Q9BTZ2 278 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 CHRNA10Q9GZZ6 450 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 KLHL25Q9H0H3 589 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 CHST8Q9H2A9 424 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF71Q9NQZ8 489 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-222ENST00000556768 SYBUQ9NX95 663 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 ANAPC2Q9UJX6 822 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 SRPK3Q9UPE1 567 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 MAD1L1Q9Y6D9 718 aa7.07□□□□□ -1.28
SCFD1-222ENST00000556768 BSNQ9UPA5 3926 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 COL27A1Q8IZC6 1860 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 FAM237BA0A1B0GVD1 139 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 SUV39H1O43463 412 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 AVILO75366 819 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 FKBP9O95302 570 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 CELA3AP09093 270 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PIM1P11309 404 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PVRP15151 417 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ALAS2P22557 587 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 RPS3P23396 243 aaKnown RBP eCLIP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 FNTAP49354 379 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 DCDP81605 110 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 NAA25Q14CX7 972 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 UGT8Q16880 541 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 KIAA0930Q6ICG6 404 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 CES3Q6UWW8 571 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 CDHR3Q6ZTQ4 885 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PCGF5Q86SE9 256 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PTRH1Q86Y79 214 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 LMNTD2Q8IXW0 634 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 SYTL1Q8IYJ3 562 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 DSELQ8IZU8 1212 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 KRT222Q8N1A0 295 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 MCUQ8NE86 351 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 OR1L3Q8NH93 324 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ACTRT1Q8TDG2 376 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 DLG3Q92796 817 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms