RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FOPNLQ96NB1 174 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 IL17FQ96PD4 163 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 FMO2Q99518 471 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 DDA1Q9BW61 102 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 CHRNA10Q9GZZ6 450 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 TSPYL1Q9H0U9 437 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 APMAPQ9HDC9 416 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 NSMCE4AQ9NXX6 385 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 SLC39A1Q9NY26 324 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 NINJ2Q9NZG7 142 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 FOXJ2Q9P0K8 574 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 CIDEBQ9UHD4 219 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 TRMT6Q9UJA5 497 aaKnown RBP9.33□□□□□ -0.92
SRP54-210ENST00000556380 BTRCQ9Y297 605 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 MTO1Q9Y2Z2 717 aaKnown RBP9.33□□□□□ -0.92
SRP54-210ENST00000556380 IGSF10Q6WRI0 2623 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 SEC16AO15027 2179 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 A0A087WV48 116 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 PIPSLA2A3N6 862 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 SLC9B1P1A6NJY1 282 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 C2orf74A8MZ97 194 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 ESPNB1AK53 854 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.32□□□□□ -0.92
SRP54-210ENST00000556380 PRAMEF10O60809 474 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 RASSF9O75901 435 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 ZBTB11O95625 1053 aaPredicted RBP9.32□□□□□ -0.92
SRP54-210ENST00000556380 ST6GAL1P15907 406 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 UGT2B7P16662 529 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 SEPHS1P49903 392 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 RAB15P59190 212 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 HSD11B2P80365 405 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 ILF2Q12905 390 aaKnown RBP9.32□□□□□ -0.92
SRP54-210ENST00000556380 KIR2DS3Q14952 304 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 ZIC1Q15915 447 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 ST3GAL2Q16842 350 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 ANKS6Q68DC2 871 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 SPESP1Q6UW49 350 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 CEP128Q6ZU80 1094 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 DTX1Q86Y01 620 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 CEP97Q8IW35 865 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 C2orf73Q8N5S3 287 aaPredicted RBP9.32□□□□□ -0.92
SRP54-210ENST00000556380 GPATCH11Q8N954 259 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 OR9A1PQ8NGU1 263 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 SKA2Q8WVK7 121 aaPredicted RBP9.32□□□□□ -0.92
SRP54-210ENST00000556380 VPS39Q96JC1 886 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 TRAPPC9Q96Q05 1148 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 PKP4Q99569 1192 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 CPNE1Q99829 537 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 SLC12A9Q9BXP2 914 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 TXLNGYQ9BZA5 131 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 ASPSCR1Q9BZE9 553 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 MTRF1LQ9UGC7 380 aaKnown RBP9.32□□□□□ -0.92
SRP54-210ENST00000556380 ADAMTS6Q9UKP5 1117 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 IKZF3Q9UKT9 509 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 NFU1Q9UMS0 254 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 B3GALT1Q9Y5Z6 326 aa9.32□□□□□ -0.92
SRP54-210ENST00000556380 CACNA1GO43497 2377 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 FAM95CA0A1B0GW59 222 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 A0A1W2PPV9 198 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 HMX2A2RU54 273 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 GSAPA4D1B5 854 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 SLC16A5O15375 505 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 KDM1AO60341 852 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 FAM155BO75949 473 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 CATP04040 527 aaKnown RBP9.31□□□□□ -0.92
SRP54-210ENST00000556380 RHOXF2BP0C7M4 288 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 MSL3P1P0C860 447 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 EBLN1P0CF75 366 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 FGF5P12034 268 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 PVRP15151 417 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
SRP54-210ENST00000556380 STX2P32856 288 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 GP5P40197 560 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 GABRA4P48169 554 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 PCBP4P57723 403 aaKnown RBP9.31□□□□□ -0.92
SRP54-210ENST00000556380 IL2P60568 153 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 POU4F1Q01851 419 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 NAB1Q13506 487 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 FASTKQ14296 549 aaKnown RBP9.31□□□□□ -0.92
SRP54-210ENST00000556380 ZNF460Q14592 562 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 IL11RAQ14626 422 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 KCNAB1Q14722 419 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 ARHGAP19Q14CB8 494 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 EFTUD2Q15029 972 aaKnown RBP eCLIP9.31□□□□□ -0.927e-8■□□□□ 11.2
SRP54-210ENST00000556380 SLC5A12Q1EHB4 618 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 DCAF12Q5T6F0 453 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 GRTP1Q5TC63 336 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 LRRC8EQ6NSJ5 796 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 TTC23LQ6PF05 361 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 TRIM73Q86UV7 250 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 ZFAND4Q86XD8 727 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 FAM129CQ86XR2 697 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 LRRC56Q8IYG6 542 aaPredicted RBP9.31□□□□□ -0.92
SRP54-210ENST00000556380 PPM1NQ8N819 430 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 MAGEC3Q8TD91 643 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 CDKL2Q92772 493 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 LINGO1Q96FE5 620 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 ELMO2Q96JJ3 720 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 TEFMQ96QE5 360 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms